Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC023141.4-201ENST00000412031 328 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 RAB9AP3-201ENST00000412737 573 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC016831.2-201ENST00000417179 352 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 PGBD4P6-201ENST00000421501 610 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 MTND4P18-201ENST00000447010 465 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 VN1R34P-201ENST00000447387 883 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 RAB9AP1-201ENST00000449393 573 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 RBMY2UP-201ENST00000453474 324 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC026801.1-201ENST00000497178 464 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 MTND4LP22-201ENST00000508209 276 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 FCF1P8-201ENST00000510322 597 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC090136.1-201ENST00000520009 240 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC107953.1-201ENST00000522216 297 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 PSMA3P-201ENST00000555485 635 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AL645944.1-201ENST00000603857 493 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AC021646.1-201ENST00000605469 484 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AL121757.2-201ENST00000611223 313 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.72-201ENST00000362894 103 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.100-201ENST00000363141 102 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.324-201ENST00000365165 102 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 RNU6-898P-201ENST00000365627 104 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 PTMAP2-201ENST00000397627 327 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 RN7SKP27-201ENST00000410684 333 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 RPL32P35-201ENST00000415214 394 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC009161.1-201ENST00000417306 376 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 RPL21P111-201ENST00000418453 477 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 USP9YP20-201ENST00000419224 558 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AL365496.1-201ENST00000426885 215 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 HMGN2P10-201ENST00000448085 265 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC025518.1-201ENST00000479856 347 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC098799.2-201ENST00000509466 868 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC104619.4-201ENST00000510773 249 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC010486.1-201ENST00000511793 424 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 SNORA19.2-201ENST00000516013 114 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 RNU6-1069P-201ENST00000516612 133 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 BTF3P12-201ENST00000519620 469 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 MIR3941-201ENST00000582572 103 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AL451007.1-201ENST00000595491 289 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AL161629.2-201ENST00000615347 275 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 MIR6134-201ENST00000617606 109 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.11□□□□□ -1.91
RUNDC3AQ59EK9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC093908.1-201ENST00000623125 8092 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 MIR200C-201ENST00000384980 68 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 RN7SKP123-201ENST00000410732 291 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC018644.1-201ENST00000429934 551 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AL159987.2-201ENST00000432754 307 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 RPS15AP5-201ENST00000436276 388 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AL353572.1-201ENST00000442490 417 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 RNU1-95P-201ENST00000516357 160 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 RNU1-128P-201ENST00000516704 160 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 CYCSP27-201ENST00000527643 293 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AP000763.2-201ENST00000540641 163 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 NACAP3-201ENST00000552100 481 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AL121579.1-201ENST00000555129 305 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 LINC00933-203ENST00000559812 219 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 MIR5692C1-201ENST00000585309 91 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC123912.5-201ENST00000605470 343 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 FAM157A-202ENST00000615155 405 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC009248.2-201ENST00000619826 254 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 AC039056.2-201ENST00000622261 511 ntBASIC3.1□□□□□ -1.91
RUNDC3AQ59EK9 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms