Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 YWHAEP7-203ENST00000622054 312 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.1□□□□□ -2.07
SMARCB1Q12824 AC099654.13-201ENST00000639774 207 ntBASIC2.1□□□□□ -2.07
SMARCB1Q12824 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC092104.1-201ENST00000497346 1441 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 Y_RNA.560-201ENST00000384689 102 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 SNORA46.1-201ENST00000391069 153 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 SNORD115.1-201ENST00000391109 76 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SMARCB1Q12824 FCF1P10-201ENST00000407590 479 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 RNU6-920P-201ENST00000410926 92 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 ELOCP17-201ENST00000414751 326 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC027124.2-201ENST00000428249 105 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 RPL7P34-201ENST00000433316 712 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AL445567.1-201ENST00000439121 144 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AL590365.1-201ENST00000450788 243 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 FABP5P13-201ENST00000452144 328 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC139453.3-201ENST00000493276 369 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 GZMAP1-201ENST00000503054 631 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 MTND4P2-201ENST00000507767 1203 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 RNU6-295P-201ENST00000516901 104 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 RNU6-232P-201ENST00000517144 64 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC022634.1-201ENST00000520765 532 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC109446.2-201ENST00000567872 497 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 ROCK1P1-201ENST00000573767 549 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 MIR548AB-201ENST00000584917 84 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC009314.1-201ENST00000603871 304 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC063944.3-201ENST00000609969 533 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC090970.3-201ENST00000612566 866 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC008498.1-201ENST00000613012 531 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC025594.3-201ENST00000613068 790 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC006338.1-201ENST00000618453 749 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC244517.12-201ENST00000623581 663 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC091932.3-201ENST00000624223 323 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 AC241585.2-209ENST00000638217 143 ntBASIC2.09□□□□□ -2.07
SMARCB1Q12824 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.09□□□□□ -2.08
SMARCB1Q12824 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 OR56A5-201ENST00000340110 738 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 RNU6-188P-201ENST00000364207 107 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 RNA5SP37-201ENST00000365420 130 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 MIR583-201ENST00000384846 75 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 MIR17-201ENST00000385012 84 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 Y_RNA.608-201ENST00000410647 95 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 RNU2-40P-201ENST00000410833 196 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 BPY2DP-201ENST00000422208 265 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC007283.2-201ENST00000424739 197 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AL356583.2-201ENST00000426536 280 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AL591806.2-201ENST00000433122 173 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 RPS15AP5-201ENST00000436276 388 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 RPL26P9-201ENST00000457466 433 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 BZW1P2-201ENST00000473537 826 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 RPL30P6-201ENST00000475925 342 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AP000797.1-201ENST00000478870 387 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 RNU6-237P-201ENST00000515985 71 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 SCARNA11.3-201ENST00000517276 130 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC104763.2-201ENST00000604179 382 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AC120349.3-201ENST00000624377 529 ntBASIC2.08□□□□□ -2.08
SMARCB1Q12824 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
SMARCB1Q12824 AL356292.1-201ENST00000283110 373 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SMARCB1Q12824 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SMARCB1Q12824 RNU6-278P-201ENST00000390945 109 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 RPL22P17-201ENST00000438729 315 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.07□□□□□ -2.08
SMARCB1Q12824 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.07□□□□□ -2.08
SMARCB1Q12824 AC112204.1-201ENST00000502591 103 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 AC116337.1-201ENST00000509680 687 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 SCARNA17.1-201ENST00000516211 143 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 SCARNA17.2-201ENST00000516334 143 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
SMARCB1Q12824 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.07□□□□□ -2.08
SMARCB1Q12824 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms