Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC009961.3-201ENST00000449832 765 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC012308.1-201ENST00000451232 178 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-956P-201ENST00000458868 103 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC090515.1-201ENST00000465295 476 ntBASIC2.53□□□□□ -2
SCN1BQ07699 FTH1P2-201ENST00000466086 412 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RPL7P43-201ENST00000478876 753 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC140059.1-201ENST00000489238 361 ntBASIC2.53□□□□□ -2
SCN1BQ07699 RN7SL504P-201ENST00000494496 287 ntBASIC2.53□□□□□ -2
SCN1BQ07699 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.53□□□□□ -2
SCN1BQ07699 RNU6-445P-201ENST00000516949 107 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC009812.2-201ENST00000517657 457 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.53□□□□□ -2
SCN1BQ07699 CBX3P7-201ENST00000532876 502 ntBASIC2.53□□□□□ -2
SCN1BQ07699 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
SCN1BQ07699 MIR3605-201ENST00000583214 100 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC073539.2-201ENST00000597113 165 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC087752.4-201ENST00000605911 462 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC093788.1-201ENST00000609356 927 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC069200.1-201ENST00000609511 323 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC005332.10-201ENST00000612725 619 ntBASIC2.53□□□□□ -2
SCN1BQ07699 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SCN1BQ07699 AC072046.2-201ENST00000618366 268 ntBASIC2.53□□□□□ -2
SCN1BQ07699 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.53□□□□□ -2
SCN1BQ07699 AC026422.1-201ENST00000623961 452 ntBASIC2.53□□□□□ -2
SCN1BQ07699 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.53□□□□□ -2
SCN1BQ07699 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.53□□□□□ -2
SCN1BQ07699 MIR622-201ENST00000638396 96 ntBASIC2.53□□□□□ -2
SCN1BQ07699 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.53□□□□□ -2
SCN1BQ07699 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
SCN1BQ07699 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
SCN1BQ07699 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCN1BQ07699 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCN1BQ07699 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN1BQ07699 AL390237.1-201ENST00000404226 1415 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC073325.2-201ENST00000339545 159 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 SNORA38.1-201ENST00000364172 131 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 SNORA71.1-201ENST00000364523 117 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SCN1BQ07699 RNU6-1140P-201ENST00000410517 106 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.52□□□□□ -2.01
SCN1BQ07699 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN1BQ07699 AC003685.2-201ENST00000422795 395 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 TOMM20P4-201ENST00000427861 435 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 MTND4P32-201ENST00000437189 1237 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN1BQ07699 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 MRPL50P4-201ENST00000446432 475 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 RNU7-182P-201ENST00000459009 62 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 ARL2BPP4-201ENST00000506854 471 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 MTND3P25-201ENST00000509243 135 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
SCN1BQ07699 RNA5SP503-201ENST00000517047 117 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 FAM92A1P1-201ENST00000528023 890 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 MIR4775-201ENST00000581168 75 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC060766.3-201ENST00000591442 263 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC109347.2-201ENST00000610220 349 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC099842.1-201ENST00000619919 596 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 AC010297.1-201ENST00000623948 149 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 SCARNA4-202ENST00000625402 129 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 SEPT14P19-203ENST00000633205 211 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
SCN1BQ07699 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN1BQ07699 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.52□□□□□ -2.01
SCN1BQ07699 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.52□□□□□ -2.01
SCN1BQ07699 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCN1BQ07699 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
SCN1BQ07699 RNU1-72P-201ENST00000362976 153 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 RNU6-1029P-201ENST00000384109 107 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 SNORD116-20-201ENST00000384529 92 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 RN7SKP27-201ENST00000410684 333 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC138623.1-201ENST00000418060 216 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN1BQ07699 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.51□□□□□ -2.01
SCN1BQ07699 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN1BQ07699 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN1BQ07699 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN1BQ07699 C1DP4-201ENST00000455429 424 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SCN1BQ07699 AC073901.1-201ENST00000462471 408 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AP000852.1-201ENST00000472460 573 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.51□□□□□ -2.01
SCN1BQ07699 AP005902.1-201ENST00000521358 186 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 OR4R1P-201ENST00000529879 463 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AP002963.1-201ENST00000530590 184 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AL133241.1-201ENST00000556832 487 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.51□□□□□ -2.01
SCN1BQ07699 MIR4528-201ENST00000577763 90 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.51□□□□□ -2.01
SCN1BQ07699 AC110760.3-201ENST00000598794 467 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC068790.2-201ENST00000602601 557 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AL138963.2-201ENST00000605137 226 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC021646.1-201ENST00000605469 484 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AL162274.2-201ENST00000614406 332 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms