Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.34□□□□□ -2.19
HOXC5Q00444 LINC00933-203ENST00000559812 219 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AC004987.4-201ENST00000603383 338 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AL021368.1-201ENST00000607490 540 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AL133445.2-201ENST00000611191 527 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
HOXC5Q00444 AC018926.1-201ENST00000616335 435 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 AC241585.2-209ENST00000638217 143 ntBASIC1.34□□□□□ -2.19
HOXC5Q00444 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
HOXC5Q00444 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
HOXC5Q00444 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.33□□□□□ -2.2
HOXC5Q00444 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.33□□□□□ -2.2
HOXC5Q00444 CDC27P3-201ENST00000635418 1910 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 MIR19A-201ENST00000384878 82 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 MIR95-201ENST00000385072 81 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 MIR517C-201ENST00000385103 95 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 MIR561-201ENST00000385216 97 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AC068050.1-201ENST00000394891 380 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.33□□□□□ -2.2
HOXC5Q00444 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HOXC5Q00444 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.33□□□□□ -2.2
HOXC5Q00444 HMGB1P27-201ENST00000431429 603 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 USP9YP24-201ENST00000434374 697 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.33□□□□□ -2.2
HOXC5Q00444 AC005094.1-201ENST00000440420 368 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 PAXBP1P1-201ENST00000449315 447 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AC087884.1-201ENST00000469738 328 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AC023194.1-201ENST00000493084 308 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 YWHAEP4-201ENST00000505390 198 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 OR5B19P-201ENST00000531766 928 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 ARL2BPP2-201ENST00000550907 489 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AL354943.1-201ENST00000572103 781 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.33□□□□□ -2.2
HOXC5Q00444 AC124016.2-201ENST00000610058 665 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.33□□□□□ -2.2
HOXC5Q00444 AP000676.3-201ENST00000623299 569 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 AC138627.2-201ENST00000624202 601 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 PCMTD1P7-201ENST00000634506 357 ntBASIC1.33□□□□□ -2.2
HOXC5Q00444 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HOXC5Q00444 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HOXC5Q00444 SNORA8-201ENST00000384574 139 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 RNU6-174P-201ENST00000410406 106 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 VN1R108P-201ENST00000431580 830 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
HOXC5Q00444 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.32□□□□□ -2.2
HOXC5Q00444 ZNF886P-201ENST00000450781 723 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.32□□□□□ -2.2
HOXC5Q00444 MTND1P16-201ENST00000465177 898 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.32□□□□□ -2.2
HOXC5Q00444 MTCYBP35-201ENST00000503630 1137 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
HOXC5Q00444 AC113347.3-201ENST00000509113 148 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 RNU6-64P-201ENST00000517119 105 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.32□□□□□ -2.2
HOXC5Q00444 MTCYBP23-201ENST00000558717 1102 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 MIR4782-201ENST00000577987 79 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.32□□□□□ -2.2
HOXC5Q00444 AC092953.2-201ENST00000608000 699 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 MIR6134-201ENST00000617606 109 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 AC013470.4-201ENST00000619978 986 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.32□□□□□ -2.2
HOXC5Q00444 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.32□□□□□ -2.2
HOXC5Q00444 AC002543.1-201ENST00000299783 1954 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 Y_RNA.110-201ENST00000363220 99 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 CISD1P1-201ENST00000393907 327 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HOXC5Q00444 AL033519.2-201ENST00000403958 392 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.31□□□□□ -2.2
HOXC5Q00444 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.31□□□□□ -2.2
HOXC5Q00444 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.31□□□□□ -2.2
HOXC5Q00444 RPF2P2-201ENST00000504693 896 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.31□□□□□ -2.2
HOXC5Q00444 AC117522.2-201ENST00000510049 657 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 SNORA31.3-201ENST00000516029 96 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 RNU6-572P-201ENST00000516724 80 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.31□□□□□ -2.2
HOXC5Q00444 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.31□□□□□ -2.2
HOXC5Q00444 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.31□□□□□ -2.2
HOXC5Q00444 PSMA3P-201ENST00000555485 635 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC026271.5-201ENST00000577873 130 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
HOXC5Q00444 MIR4285-201ENST00000581001 85 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HOXC5Q00444 ELOCP5-201ENST00000604924 333 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC112220.2-201ENST00000605513 533 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AL158211.2-201ENST00000607282 395 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.31□□□□□ -2.2
HOXC5Q00444 AC131235.4-201ENST00000609288 620 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC108479.2-201ENST00000617314 601 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.31□□□□□ -2.2
HOXC5Q00444 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
HOXC5Q00444 AP000776.1-201ENST00000530032 1663 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AP000648.3-201ENST00000623539 4507 ntBASIC1.31□□□□□ -2.2
HOXC5Q00444 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms