Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
PRKDCP78527 Z83818.1-201ENST00000603584 150 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 AC108676.2-201ENST00000605225 163 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 RMST_5.1-201ENST00000618704 126 ntBASIC0.32□□□□□ -2.36
PRKDCP78527 Y_RNA.493-201ENST00000384422 102 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 RNU6-1328P-201ENST00000410938 106 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC022447.1-201ENST00000515358 464 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 RNU7-193P-201ENST00000516723 65 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.31□□□□□ -2.36
PRKDCP78527 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.31□□□□□ -2.36
PRKDCP78527 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.31□□□□□ -2.36
PRKDCP78527 U6.48-201ENST00000618523 106 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC027309.3-201ENST00000623419 351 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 RNU6-220P-201ENST00000390919 107 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.31□□□□□ -2.36
PRKDCP78527 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.31□□□□□ -2.36
PRKDCP78527 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.31□□□□□ -2.36
PRKDCP78527 RNU2-19P-201ENST00000517288 84 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC068620.3-201ENST00000602749 560 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC008945.2-201ENST00000606056 604 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.31□□□□□ -2.36
PRKDCP78527 RNU6-1187P-201ENST00000364771 110 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 Y_RNA.572-201ENST00000384757 98 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 RPS15AP38-201ENST00000413110 372 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.31□□□□□ -2.36
PRKDCP78527 AC092634.2-201ENST00000428146 1010 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 BUD31P2-201ENST00000449374 300 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC091489.2-201ENST00000566263 604 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 MIR5190-201ENST00000581537 80 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC092474.3-201ENST00000603022 568 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AL138963.2-201ENST00000605137 226 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 AC097372.5-201ENST00000623665 376 ntBASIC0.31□□□□□ -2.36
PRKDCP78527 MRPS36P2-201ENST00000512569 299 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.3□□□□□ -2.36
PRKDCP78527 AC068276.1-201ENST00000605793 379 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AC012557.2-201ENST00000605919 418 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AP000776.1-201ENST00000530032 1663 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 MIR518A2-201ENST00000384966 87 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 MIR676-201ENST00000390702 67 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 U3.20-201ENST00000390909 217 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 RPL23AP3-201ENST00000453844 468 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AC087477.1-201ENST00000465747 340 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
PRKDCP78527 AC019288.1-201ENST00000557918 224 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.3□□□□□ -2.36
PRKDCP78527 AC115085.1-201ENST00000588924 229 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AC073569.3-201ENST00000619055 682 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AC008443.7-201ENST00000622195 246 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AL136313.1-201ENST00000624804 202 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 RNA5SP258-201ENST00000362750 119 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 RNU6-748P-201ENST00000384648 107 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 MIR146A-201ENST00000385201 99 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AC013410.2-201ENST00000422627 201 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 CBX3P3-201ENST00000508108 532 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.3□□□□□ -2.36
PRKDCP78527 AC015688.2-201ENST00000584523 262 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 AC092192.1-201ENST00000633154 1018 ntBASIC0.3□□□□□ -2.36
PRKDCP78527 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.3□□□□□ -2.36
PRKDCP78527 Y_RNA.132-201ENST00000363421 102 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 RNY3-201ENST00000365484 102 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 SNORA22-201ENST00000383907 134 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 SNORA22C-201ENST00000384614 134 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AL160275.3-201ENST00000423876 471 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.29□□□□□ -2.36
PRKDCP78527 MTCO1P3-201ENST00000429327 192 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.29□□□□□ -2.36
PRKDCP78527 KATNBL1P6-201ENST00000453433 915 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AL441985.1-201ENST00000457727 251 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.29□□□□□ -2.36
PRKDCP78527 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC0.29□□□□□ -2.36
PRKDCP78527 AC016065.2-201ENST00000514530 444 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AP005639.2-201ENST00000527592 928 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 OR1M4P-201ENST00000589199 287 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.29□□□□□ -2.36
PRKDCP78527 AC005832.2-201ENST00000538921 1430 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 MTND5P30-201ENST00000452896 1731 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
PRKDCP78527 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
PRKDCP78527 RPS15AP5-201ENST00000436276 388 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 PRPS1P1-201ENST00000445305 876 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.29□□□□□ -2.36
PRKDCP78527 AC006518.2-201ENST00000542513 940 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.29□□□□□ -2.36
PRKDCP78527 RNU6-349P-201ENST00000362402 107 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 RNU1-58P-201ENST00000362413 163 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 U3.13-201ENST00000364804 214 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 RNU6-48P-201ENST00000384161 107 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 MIR32-201ENST00000384965 70 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AL133384.1-201ENST00000412744 351 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.29□□□□□ -2.36
PRKDCP78527 EIF4EP2-201ENST00000422816 654 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.29□□□□□ -2.36
PRKDCP78527 RNU6-1095P-201ENST00000516148 108 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 RNU6-1282P-201ENST00000516735 96 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 RNU6-798P-201ENST00000516912 103 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC136628.3-201ENST00000521868 290 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.29□□□□□ -2.36
PRKDCP78527 AL356432.3-201ENST00000568952 465 ntBASIC0.29□□□□□ -2.36
PRKDCP78527 AC008121.1-201ENST00000603244 268 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms