Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MTCO3P42-201ENST00000509488 518 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.78□□□□□ -2.28
CKS1BP61024 MTCO3P39-201ENST00000514812 518 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 RNU6-927P-201ENST00000516199 100 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 CENPUP1-201ENST00000526649 1202 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 AC012414.2-201ENST00000559474 187 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.78□□□□□ -2.28
CKS1BP61024 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.78□□□□□ -2.28
CKS1BP61024 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.78□□□□□ -2.28
CKS1BP61024 RPL30P11-203ENST00000598995 310 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 AL132822.1-201ENST00000617063 513 ntBASIC0.78□□□□□ -2.28
CKS1BP61024 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
CKS1BP61024 AC138393.1-203ENST00000327086 343 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 RNU1-124P-201ENST00000363861 145 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 RNA5SP126-201ENST00000365092 109 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CKS1BP61024 RNU6-26P-201ENST00000383985 107 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 RPL17P50-201ENST00000396131 546 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AL021407.1-201ENST00000404531 386 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 OR6C66P-201ENST00000414917 930 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AL022400.1-201ENST00000423946 935 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC092634.2-201ENST00000428146 1010 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.77□□□□□ -2.29
CKS1BP61024 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.77□□□□□ -2.29
CKS1BP61024 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.77□□□□□ -2.29
CKS1BP61024 OFD1P3Y-201ENST00000453312 783 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 snoU13.26-201ENST00000459452 105 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC004223.1-201ENST00000479840 271 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 RPL36AP21-201ENST00000490372 323 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC079140.2-201ENST00000506193 142 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC008628.1-201ENST00000508663 265 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC010460.2-201ENST00000509054 677 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.77□□□□□ -2.29
CKS1BP61024 AC136932.1-201ENST00000574771 208 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 MIR4421-201ENST00000578133 69 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.77□□□□□ -2.29
CKS1BP61024 AL158827.2-201ENST00000602494 330 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 AL691447.3-201ENST00000635020 330 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
CKS1BP61024 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CKS1BP61024 ICE2P2-201ENST00000483823 2787 ntBASIC0.77□□□□□ -2.29
CKS1BP61024 NACAP2-201ENST00000318548 624 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 SNORD51.1-201ENST00000365405 77 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 MIR513A1-201ENST00000385138 129 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 TXNP7-201ENST00000406296 293 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 MIR1289-2-201ENST00000408360 111 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 RNU2-32P-201ENST00000411193 191 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.76□□□□□ -2.29
CKS1BP61024 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.76□□□□□ -2.29
CKS1BP61024 AC021382.1-201ENST00000483523 359 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.76□□□□□ -2.29
CKS1BP61024 MTCYBP43-201ENST00000513621 740 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 RNU5B-3P-201ENST00000516601 115 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 AP006587.4-201ENST00000526053 529 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.76□□□□□ -2.29
CKS1BP61024 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.76□□□□□ -2.29
CKS1BP61024 CLIC4P2-201ENST00000601934 717 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CKS1BP61024 AC092140.2-201ENST00000618027 521 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 MIR8063-201ENST00000621930 81 ntBASIC0.76□□□□□ -2.29
CKS1BP61024 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CKS1BP61024 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
CKS1BP61024 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CKS1BP61024 RNU6-1078P-201ENST00000364522 103 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 RNU6-546P-201ENST00000383991 107 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 RNU6-796P-201ENST00000391086 107 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 POLR2J4-204ENST00000418424 324 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AC013410.2-201ENST00000422627 201 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 TPTE2P1-204ENST00000435256 593 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 PGBD4P5-201ENST00000445958 426 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AC114982.1-201ENST00000469402 321 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.75□□□□□ -2.29
CKS1BP61024 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.75□□□□□ -2.29
CKS1BP61024 TRAV32-201ENST00000553993 340 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 MIR3660-201ENST00000584845 100 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AC023043.2-201ENST00000589678 1026 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AC091057.3-201ENST00000602684 733 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AL139344.1-201ENST00000605228 195 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AL583856.2-201ENST00000606298 543 ntBASIC0.75□□□□□ -2.29
CKS1BP61024 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.75□□□□□ -2.29
CKS1BP61024 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CKS1BP61024 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.75□□□□□ -2.29
CKS1BP61024 SNORA7.1-201ENST00000363750 139 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.74□□□□□ -2.29
CKS1BP61024 UBE2V2P3-201ENST00000433562 437 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 AL035666.1-201ENST00000446195 348 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.74□□□□□ -2.29
CKS1BP61024 RPL7P43-201ENST00000478876 753 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.74□□□□□ -2.29
CKS1BP61024 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS1BP61024 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.74□□□□□ -2.29
CKS1BP61024 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.74□□□□□ -2.29
CKS1BP61024 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.74□□□□□ -2.29
CKS1BP61024 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS1BP61024 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.74□□□□□ -2.29
CKS1BP61024 SUB1P4-201ENST00000566062 339 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 MIR4303-201ENST00000581299 66 ntBASIC0.74□□□□□ -2.29
CKS1BP61024 AC034229.4-201ENST00000607861 441 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms