Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.36□□□□□ -1.87
SUMO3P55854 KLKP1-201ENST00000595979 403 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 AC245389.1-201ENST00000605141 529 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 MIR1302-1-201ENST00000637932 143 ntBASIC3.36□□□□□ -1.87
SUMO3P55854 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SUMO3P55854 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SUMO3P55854 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SUMO3P55854 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
SUMO3P55854 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SUMO3P55854 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.35□□□□□ -1.87
SUMO3P55854 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SUMO3P55854 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SUMO3P55854 RNU1-64P-201ENST00000365443 163 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 RPL37P10-201ENST00000412884 288 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AL590632.1-201ENST00000424289 371 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 ARF4P2-201ENST00000430209 526 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.35□□□□□ -1.87
SUMO3P55854 AL031274.1-201ENST00000450334 232 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 RNU6-1037P-201ENST00000459571 107 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.35□□□□□ -1.87
SUMO3P55854 AC116655.1-201ENST00000508324 901 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AC002456.2-201ENST00000509356 380 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 RNU6-377P-201ENST00000515965 102 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 SNORA43.2-201ENST00000516652 128 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 TRMT10BP1-201ENST00000519377 943 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.35□□□□□ -1.87
SUMO3P55854 AL121821.2-201ENST00000556081 394 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AL355375.2-201ENST00000574825 175 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 POLR3GP2-201ENST00000588366 668 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 MIR6798-201ENST00000612887 67 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AC010378.1-201ENST00000619270 362 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 AL732372.2-225ENST00000642124 456 ntBASIC3.35□□□□□ -1.87
SUMO3P55854 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SUMO3P55854 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SUMO3P55854 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SUMO3P55854 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SUMO3P55854 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SUMO3P55854 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.34□□□□□ -1.87
SUMO3P55854 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.34□□□□□ -1.87
SUMO3P55854 RNU6-78P-201ENST00000362897 107 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SUMO3P55854 Y_RNA.384-201ENST00000383909 102 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 Y_RNA.387-201ENST00000383918 102 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 Y_RNA.509-201ENST00000384506 99 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AL391417.1-201ENST00000404100 426 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 RNU6-293P-201ENST00000411259 106 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.34□□□□□ -1.87
SUMO3P55854 AL117339.3-201ENST00000418733 162 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 RPS3AP52-201ENST00000435639 297 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 NOTCH2P1-201ENST00000443481 624 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 Y_RNA.635-201ENST00000459041 101 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.34□□□□□ -1.87
SUMO3P55854 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.34□□□□□ -1.87
SUMO3P55854 MTCYBP40-201ENST00000509390 1135 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 RNU6-581P-201ENST00000516214 105 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 Y_RNA.675-201ENST00000516389 149 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 RNU6-579P-201ENST00000516879 102 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 SNORD19.2-201ENST00000516978 73 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AC104576.1-201ENST00000524225 88 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.34□□□□□ -1.87
SUMO3P55854 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.34□□□□□ -1.87
SUMO3P55854 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.34□□□□□ -1.87
SUMO3P55854 CR383656.8-201ENST00000549046 145 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.34□□□□□ -1.87
SUMO3P55854 AC020914.4-201ENST00000597690 277 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 AL160281.1-201ENST00000605307 311 ntBASIC3.34□□□□□ -1.87
SUMO3P55854 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.34□□□□□ -1.87
SUMO3P55854 MTND4P29-201ENST00000503122 1372 ntBASIC3.34□□□□□ -1.88
SUMO3P55854 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.34□□□□□ -1.88
SUMO3P55854 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SUMO3P55854 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
SUMO3P55854 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SUMO3P55854 SNORD62.1-201ENST00000362541 86 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 RNU6-593P-201ENST00000364716 112 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 RNU6-827P-201ENST00000365553 106 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 Y_RNA.482-201ENST00000384377 111 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AL138878.1-201ENST00000405131 347 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 RNU6ATAC-201ENST00000408749 126 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 ATG3P1-201ENST00000419507 911 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.33□□□□□ -1.88
SUMO3P55854 RPS15AP10-201ENST00000432472 382 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AC092001.1-201ENST00000453012 261 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.33□□□□□ -1.88
SUMO3P55854 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.33□□□□□ -1.88
SUMO3P55854 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.33□□□□□ -1.88
SUMO3P55854 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.33□□□□□ -1.88
SUMO3P55854 IMMP1LP2-201ENST00000552954 492 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.33□□□□□ -1.88
SUMO3P55854 AC106785.1-201ENST00000565935 262 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AC025281.1-201ENST00000567026 265 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 MIR4795-201ENST00000584182 89 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.33□□□□□ -1.88
SUMO3P55854 AL121917.1-203ENST00000605534 577 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AC011890.2-201ENST00000613393 294 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 AL359314.1-201ENST00000616913 261 ntBASIC3.33□□□□□ -1.88
SUMO3P55854 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.33□□□□□ -1.88
SUMO3P55854 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 331.4 ms