Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ATP5A1P2-202ENST00000616464 443 ntBASIC2.76□□□□□ -1.97
CDH13P55290 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH13P55290 MIR6863-201ENST00000636112 90 ntBASIC2.76□□□□□ -1.97
CDH13P55290 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH13P55290 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH13P55290 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH13P55290 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH13P55290 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH13P55290 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH13P55290 RNU6-1179P-201ENST00000384667 107 ntBASIC2.75□□□□□ -1.97
CDH13P55290 MTCO3P40-201ENST00000392516 676 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AL139039.1-201ENST00000401900 692 ntBASIC2.75□□□□□ -1.97
CDH13P55290 RPL21P90-201ENST00000415692 466 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AL353621.1-201ENST00000418219 243 ntBASIC2.75□□□□□ -1.97
CDH13P55290 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH13P55290 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH13P55290 AL118520.1-201ENST00000450770 291 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH13P55290 AC027673.1-201ENST00000456245 405 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC103975.1-201ENST00000482506 483 ntBASIC2.75□□□□□ -1.97
CDH13P55290 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
CDH13P55290 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH13P55290 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH13P55290 OR5AQ1P-201ENST00000527596 927 ntBASIC2.75□□□□□ -1.97
CDH13P55290 HPRT1P3-201ENST00000539521 576 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH13P55290 AL121821.2-201ENST00000556081 394 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC245505.1-201ENST00000556398 224 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH13P55290 AC008752.3-201ENST00000588113 712 ntBASIC2.75□□□□□ -1.97
CDH13P55290 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH13P55290 BNIP3P22-201ENST00000593399 556 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC091152.3-201ENST00000604227 325 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH13P55290 AL359880.1-201ENST00000621879 266 ntBASIC2.75□□□□□ -1.97
CDH13P55290 AC004944.1-201ENST00000517807 3059 ntBASIC2.75□□□□□ -1.97
CDH13P55290 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CDH13P55290 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH13P55290 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.75□□□□□ -1.97
CDH13P55290 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH13P55290 OR4G2P-201ENST00000328113 903 ntBASIC2.74□□□□□ -1.97
CDH13P55290 MIR422A-201ENST00000362286 90 ntBASIC2.74□□□□□ -1.97
CDH13P55290 MIR208A-201ENST00000362287 71 ntBASIC2.74□□□□□ -1.97
CDH13P55290 SNORD14B-201ENST00000364533 90 ntBASIC2.74□□□□□ -1.97
CDH13P55290 SNORA68.1-201ENST00000364537 132 ntBASIC2.74□□□□□ -1.97
CDH13P55290 RNU6-1158P-201ENST00000391167 107 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH13P55290 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH13P55290 SAR1AP4-201ENST00000429225 591 ntBASIC2.74□□□□□ -1.97
CDH13P55290 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH13P55290 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH13P55290 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH13P55290 AC107626.1-201ENST00000471084 183 ntBASIC2.74□□□□□ -1.97
CDH13P55290 RPL9P33-201ENST00000484311 566 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AL163973.1-201ENST00000484753 577 ntBASIC2.74□□□□□ -1.97
CDH13P55290 FAM92A1P2-202ENST00000504766 877 ntBASIC2.74□□□□□ -1.97
CDH13P55290 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH13P55290 AC091826.1-201ENST00000514065 313 ntBASIC2.74□□□□□ -1.97
CDH13P55290 RNU6-720P-201ENST00000516363 108 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AC107016.2-201ENST00000547968 190 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH13P55290 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH13P55290 EIF1P4-201ENST00000572664 335 ntBASIC2.74□□□□□ -1.97
CDH13P55290 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH13P55290 RMST_4.1-201ENST00000616886 107 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AC139792.3-201ENST00000623525 224 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AC139792.2-201ENST00000624218 587 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AC099654.12-201ENST00000639868 649 ntBASIC2.74□□□□□ -1.97
CDH13P55290 AC000403.1-201ENST00000613696 3585 ntBASIC2.74□□□□□ -1.97
CDH13P55290 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH13P55290 AC073346.2-201ENST00000624724 2058 ntBASIC2.73□□□□□ -1.97
CDH13P55290 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.73□□□□□ -1.97
CDH13P55290 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH13P55290 SNORD3E-201ENST00000362899 217 ntBASIC2.73□□□□□ -1.97
CDH13P55290 RNU6-1322P-201ENST00000364309 107 ntBASIC2.73□□□□□ -1.97
CDH13P55290 RNU6-1280P-201ENST00000365211 107 ntBASIC2.73□□□□□ -1.97
CDH13P55290 RNU6-996P-201ENST00000365438 107 ntBASIC2.73□□□□□ -1.97
CDH13P55290 RNU6-898P-201ENST00000365627 104 ntBASIC2.73□□□□□ -1.97
CDH13P55290 MIR34A-201ENST00000385130 110 ntBASIC2.73□□□□□ -1.97
CDH13P55290 RNU6-903P-201ENST00000391270 109 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AL513475.1-201ENST00000406602 315 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AL592148.1-201ENST00000413568 445 ntBASIC2.73□□□□□ -1.97
CDH13P55290 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH13P55290 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH13P55290 AL671855.1-201ENST00000446875 1203 ntBASIC2.73□□□□□ -1.97
CDH13P55290 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 AC116655.1-201ENST00000508324 901 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 RNU5F-8P-201ENST00000515941 111 ntBASIC2.73□□□□□ -1.97
CDH13P55290 SNORA40.12-201ENST00000516329 111 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 AC104383.1-201ENST00000530297 370 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AP002404.1-201ENST00000532005 451 ntBASIC2.73□□□□□ -1.97
CDH13P55290 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.73□□□□□ -1.97
CDH13P55290 AC092325.1-201ENST00000566449 554 ntBASIC2.73□□□□□ -1.97
CDH13P55290 MTATP6P3-201ENST00000581686 676 ntBASIC2.73□□□□□ -1.97
CDH13P55290 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDH13P55290 ZNF861P-201ENST00000588126 639 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms