Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH11P55287 RPL23AP11-201ENST00000475260 469 ntBASIC2.76□□□□□ -1.97
CDH11P55287 RPL30P14-201ENST00000482744 348 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH11P55287 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH11P55287 SNORD60.2-201ENST00000516883 86 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH11P55287 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH11P55287 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH11P55287 MTCO3P23-201ENST00000561363 289 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC234778.2-201ENST00000566241 354 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 MIR4801-201ENST00000582704 82 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC078899.3-201ENST00000599065 212 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AL138889.2-201ENST00000603883 242 ntBASIC2.76□□□□□ -1.97
CDH11P55287 DISC2.1-201ENST00000612827 205 ntBASIC2.76□□□□□ -1.97
CDH11P55287 DUSP12P1-201ENST00000612874 516 ntBASIC2.76□□□□□ -1.97
CDH11P55287 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH11P55287 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH11P55287 AL512643.1-201ENST00000635735 524 ntBASIC2.76□□□□□ -1.97
CDH11P55287 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH11P55287 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH11P55287 AC103988.1-201ENST00000566382 2177 ntBASIC2.76□□□□□ -1.97
CDH11P55287 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
CDH11P55287 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
CDH11P55287 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH11P55287 AL365361.1-201ENST00000566942 3481 ntBASIC2.75□□□□□ -1.97
CDH11P55287 Y_RNA.167-201ENST00000363735 109 ntBASIC2.75□□□□□ -1.97
CDH11P55287 Y_RNA.573-201ENST00000384763 105 ntBASIC2.75□□□□□ -1.97
CDH11P55287 MIR301A-201ENST00000385261 86 ntBASIC2.75□□□□□ -1.97
CDH11P55287 SNORA16.2-201ENST00000390991 127 ntBASIC2.75□□□□□ -1.97
CDH11P55287 SNORA26.7-201ENST00000391288 122 ntBASIC2.75□□□□□ -1.97
CDH11P55287 AL139039.1-201ENST00000401900 692 ntBASIC2.75□□□□□ -1.97
CDH11P55287 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH11P55287 MTND1P23-201ENST00000416931 372 ntBASIC2.75□□□□□ -1.97
CDH11P55287 AC099548.1-201ENST00000421443 426 ntBASIC2.75□□□□□ -1.97
CDH11P55287 AL139415.2-201ENST00000431968 163 ntBASIC2.75□□□□□ -1.97
CDH11P55287 RPL36AP53-201ENST00000432891 316 ntBASIC2.75□□□□□ -1.97
CDH11P55287 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH11P55287 AL714022.1-201ENST00000439897 151 ntBASIC2.75□□□□□ -1.97
CDH11P55287 NFU1P2-201ENST00000448700 469 ntBASIC2.75□□□□□ -1.97
CDH11P55287 RPS15AP27-201ENST00000449183 343 ntBASIC2.75□□□□□ -1.97
CDH11P55287 MTND3P16-201ENST00000452205 344 ntBASIC2.75□□□□□ -1.97
CDH11P55287 SNRPFP3-201ENST00000457792 225 ntBASIC2.75□□□□□ -1.97
CDH11P55287 RPS15AP34-201ENST00000487776 387 ntBASIC2.75□□□□□ -1.97
CDH11P55287 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH11P55287 RPL38P4-201ENST00000502376 214 ntBASIC2.75□□□□□ -1.97
CDH11P55287 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH11P55287 AL118558.2-201ENST00000556294 238 ntBASIC2.75□□□□□ -1.97
CDH11P55287 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH11P55287 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH11P55287 AC135507.2-201ENST00000612443 309 ntBASIC2.75□□□□□ -1.97
CDH11P55287 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH11P55287 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
CDH11P55287 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH11P55287 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CDH11P55287 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH11P55287 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH11P55287 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH11P55287 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH11P55287 RNU1-140P-201ENST00000365040 165 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RNU6-715P-201ENST00000365204 103 ntBASIC2.74□□□□□ -1.97
CDH11P55287 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH11P55287 UBA52P6-201ENST00000399822 382 ntBASIC2.74□□□□□ -1.97
CDH11P55287 MIR888-201ENST00000401186 77 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RNU2-68P-201ENST00000410878 191 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RNA5SP111-201ENST00000411386 101 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH11P55287 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH11P55287 CALM1P1-201ENST00000442082 433 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH11P55287 SCARNA18-201ENST00000459004 134 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RPL37P6-201ENST00000460682 294 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RPL21P93-201ENST00000480465 489 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH11P55287 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH11P55287 RNU4-29P-201ENST00000515943 174 ntBASIC2.74□□□□□ -1.97
CDH11P55287 SNORA31.1-201ENST00000515993 133 ntBASIC2.74□□□□□ -1.97
CDH11P55287 SNORA31.5-201ENST00000516190 133 ntBASIC2.74□□□□□ -1.97
CDH11P55287 SCARNA13-201ENST00000516672 275 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RNU6-1178P-201ENST00000516674 107 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RNU6-143P-201ENST00000516942 93 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RNU6-56P-201ENST00000516986 93 ntBASIC2.74□□□□□ -1.97
CDH11P55287 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH11P55287 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC068135.2-201ENST00000569293 1028 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH11P55287 AC010525.2-201ENST00000590920 195 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AL451007.1-201ENST00000595491 289 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC073539.2-201ENST00000597113 165 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC012119.1-201ENST00000603184 222 ntBASIC2.74□□□□□ -1.97
CDH11P55287 RBM11P1-201ENST00000604951 799 ntBASIC2.74□□□□□ -1.97
CDH11P55287 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH11P55287 AC099506.2-201ENST00000623074 221 ntBASIC2.74□□□□□ -1.97
CDH11P55287 AC018692.3-201ENST00000623929 123 ntBASIC2.74□□□□□ -1.97
CDH11P55287 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH11P55287 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms