Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.99□□□□□ -2.09
CDH6P55285 PMCHL2-203ENST00000457791 237 ntBASIC1.99□□□□□ -2.09
CDH6P55285 AC055731.1-201ENST00000474387 401 ntBASIC1.99□□□□□ -2.09
CDH6P55285 AC011005.2-201ENST00000487324 359 ntBASIC1.99□□□□□ -2.09
CDH6P55285 HSPE1P23-201ENST00000509838 286 ntBASIC1.99□□□□□ -2.09
CDH6P55285 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH6P55285 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CDH6P55285 SNORA25.11-201ENST00000515935 105 ntBASIC1.99□□□□□ -2.09
CDH6P55285 MTND4P33-201ENST00000556706 766 ntBASIC1.99□□□□□ -2.09
CDH6P55285 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.99□□□□□ -2.09
CDH6P55285 AC012435.1-202ENST00000568772 240 ntBASIC1.99□□□□□ -2.09
CDH6P55285 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
CDH6P55285 AC078899.2-201ENST00000595282 212 ntBASIC1.99□□□□□ -2.09
CDH6P55285 AC112187.2-201ENST00000604345 283 ntBASIC1.99□□□□□ -2.09
CDH6P55285 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.99□□□□□ -2.09
CDH6P55285 RNU6-91P-201ENST00000607774 107 ntBASIC1.99□□□□□ -2.09
CDH6P55285 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.99□□□□□ -2.09
CDH6P55285 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CDH6P55285 AL512643.1-201ENST00000635735 524 ntBASIC1.99□□□□□ -2.09
CDH6P55285 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CDH6P55285 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 AC138393.1-203ENST00000327086 343 ntBASIC1.98□□□□□ -2.09
CDH6P55285 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.98□□□□□ -2.09
CDH6P55285 RNU6-898P-201ENST00000365627 104 ntBASIC1.98□□□□□ -2.09
CDH6P55285 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 HSFY7P-201ENST00000432672 318 ntBASIC1.98□□□□□ -2.09
CDH6P55285 MTND1P32-201ENST00000433043 938 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 HSFY8P-201ENST00000437934 318 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AC009238.1-201ENST00000442165 424 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AC009237.6-201ENST00000446969 424 ntBASIC1.98□□□□□ -2.09
CDH6P55285 HSFY5P-201ENST00000453726 309 ntBASIC1.98□□□□□ -2.09
CDH6P55285 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.98□□□□□ -2.09
CDH6P55285 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 AC112771.1-201ENST00000463581 102 ntBASIC1.98□□□□□ -2.09
CDH6P55285 MTND1P3-201ENST00000484956 952 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.98□□□□□ -2.09
CDH6P55285 AC092436.1-201ENST00000506450 503 ntBASIC1.98□□□□□ -2.09
CDH6P55285 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
CDH6P55285 RNU2-19P-201ENST00000517288 84 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AC023050.2-201ENST00000544968 387 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.98□□□□□ -2.09
CDH6P55285 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH6P55285 MIR3146-201ENST00000580367 79 ntBASIC1.98□□□□□ -2.09
CDH6P55285 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AL365204.3-201ENST00000612448 685 ntBASIC1.98□□□□□ -2.09
CDH6P55285 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.98□□□□□ -2.09
CDH6P55285 MTND5P42-201ENST00000637720 498 ntBASIC1.98□□□□□ -2.09
CDH6P55285 AC006927.4-201ENST00000639187 543 ntBASIC1.98□□□□□ -2.09
CDH6P55285 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CDH6P55285 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CDH6P55285 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH6P55285 RNU1-72P-201ENST00000362976 153 ntBASIC1.97□□□□□ -2.09
CDH6P55285 RNY3P13-201ENST00000365542 102 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AC019129.1-201ENST00000403786 261 ntBASIC1.97□□□□□ -2.09
CDH6P55285 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH6P55285 EDDM3CP-201ENST00000415977 425 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 AL591704.1-201ENST00000432574 275 ntBASIC1.97□□□□□ -2.09
CDH6P55285 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.97□□□□□ -2.09
CDH6P55285 CR769776.1-201ENST00000441254 787 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AL161788.1-201ENST00000441805 169 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AL078601.1-201ENST00000444542 271 ntBASIC1.97□□□□□ -2.09
CDH6P55285 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.97□□□□□ -2.09
CDH6P55285 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 RNU5B-3P-201ENST00000516601 115 ntBASIC1.97□□□□□ -2.09
CDH6P55285 SNORA31.19-201ENST00000517079 126 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CDH6P55285 AL049838.1-201ENST00000563647 981 ntBASIC1.97□□□□□ -2.09
CDH6P55285 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CDH6P55285 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.97□□□□□ -2.09
CDH6P55285 MIR4307-201ENST00000582802 84 ntBASIC1.97□□□□□ -2.09
CDH6P55285 BNIP3P40-201ENST00000596017 556 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AL670379.10-201ENST00000604330 253 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AL670379.9-201ENST00000605428 253 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AC092106.3-201ENST00000611308 722 ntBASIC1.97□□□□□ -2.09
CDH6P55285 uc_338.12-201ENST00000616344 181 ntBASIC1.97□□□□□ -2.09
CDH6P55285 AL589994.2-201ENST00000621124 579 ntBASIC1.97□□□□□ -2.09
CDH6P55285 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
CDH6P55285 ZNF876P-202ENST00000398732 1485 ntBASIC1.96□□□□□ -2.1
CDH6P55285 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CDH6P55285 Y_RNA.46-201ENST00000362695 102 ntBASIC1.96□□□□□ -2.1
CDH6P55285 Y_RNA.302-201ENST00000364997 102 ntBASIC1.96□□□□□ -2.1
CDH6P55285 Y_RNA.534-201ENST00000384599 112 ntBASIC1.96□□□□□ -2.1
CDH6P55285 MIR518D-201ENST00000385014 87 ntBASIC1.96□□□□□ -2.1
CDH6P55285 RNU4-26P-201ENST00000410270 107 ntBASIC1.96□□□□□ -2.1
CDH6P55285 SSR1P2-201ENST00000415208 787 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms