Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.55□□□□□ -2
VCPP55072 AC011979.2-201ENST00000527568 352 ntBASIC2.55□□□□□ -2
VCPP55072 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.55□□□□□ -2
VCPP55072 RPS3AP4-201ENST00000555161 764 ntBASIC2.55□□□□□ -2
VCPP55072 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.55□□□□□ -2
VCPP55072 MIR4781-201ENST00000585250 76 ntBASIC2.55□□□□□ -2
VCPP55072 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.55□□□□□ -2
VCPP55072 AL670379.6-201ENST00000603753 252 ntBASIC2.55□□□□□ -2
VCPP55072 AL670379.11-201ENST00000604059 253 ntBASIC2.55□□□□□ -2
VCPP55072 AC008162.1-201ENST00000604718 254 ntBASIC2.55□□□□□ -2
VCPP55072 AL670379.1-201ENST00000604752 252 ntBASIC2.55□□□□□ -2
VCPP55072 AL670379.5-201ENST00000605253 252 ntBASIC2.55□□□□□ -2
VCPP55072 AL670379.12-201ENST00000605291 253 ntBASIC2.55□□□□□ -2
VCPP55072 AL670379.8-201ENST00000605353 252 ntBASIC2.55□□□□□ -2
VCPP55072 AC068276.1-201ENST00000605793 379 ntBASIC2.55□□□□□ -2
VCPP55072 AL670379.7-201ENST00000605823 252 ntBASIC2.55□□□□□ -2
VCPP55072 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
VCPP55072 FRG1KP-201ENST00000623592 341 ntBASIC2.55□□□□□ -2
VCPP55072 AL603839.4-201ENST00000624658 1005 ntBASIC2.55□□□□□ -2
VCPP55072 MIR3974-201ENST00000637126 96 ntBASIC2.55□□□□□ -2
VCPP55072 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VCPP55072 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
VCPP55072 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
VCPP55072 AL139276.1-201ENST00000311910 1001 ntBASIC2.54□□□□□ -2
VCPP55072 RNU4-1-201ENST00000363925 141 ntBASIC2.54□□□□□ -2
VCPP55072 RNU5E-6P-201ENST00000365574 115 ntBASIC2.54□□□□□ -2
VCPP55072 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
VCPP55072 RNY3P10-201ENST00000384764 102 ntBASIC2.54□□□□□ -2
VCPP55072 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VCPP55072 AC023141.4-201ENST00000412031 328 ntBASIC2.54□□□□□ -2
VCPP55072 AC009518.2-201ENST00000418056 731 ntBASIC2.54□□□□□ -2
VCPP55072 AC090960.1-201ENST00000421072 306 ntBASIC2.54□□□□□ -2
VCPP55072 ELOCP14-201ENST00000428070 331 ntBASIC2.54□□□□□ -2
VCPP55072 HMGB1P27-201ENST00000431429 603 ntBASIC2.54□□□□□ -2
VCPP55072 AC119618.1-201ENST00000434191 222 ntBASIC2.54□□□□□ -2
VCPP55072 MTND1P28-201ENST00000435623 950 ntBASIC2.54□□□□□ -2
VCPP55072 ELOCP7-201ENST00000439968 331 ntBASIC2.54□□□□□ -2
VCPP55072 PGBD4P3-201ENST00000440731 581 ntBASIC2.54□□□□□ -2
VCPP55072 NEFMP1-201ENST00000443423 1006 ntBASIC2.54□□□□□ -2
VCPP55072 AC011753.1-201ENST00000451001 220 ntBASIC2.54□□□□□ -2
VCPP55072 RN7SKP210-201ENST00000459176 261 ntBASIC2.54□□□□□ -2
VCPP55072 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.54□□□□□ -2
VCPP55072 MTND1P3-201ENST00000484956 952 ntBASIC2.54□□□□□ -2
VCPP55072 MRPL42P6-201ENST00000486397 371 ntBASIC2.54□□□□□ -2
VCPP55072 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.54□□□□□ -2
VCPP55072 Y_RNA.672-201ENST00000516289 104 ntBASIC2.54□□□□□ -2
VCPP55072 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
VCPP55072 SCARNA11.3-201ENST00000517276 130 ntBASIC2.54□□□□□ -2
VCPP55072 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
VCPP55072 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
VCPP55072 AC012414.6-201ENST00000568241 401 ntBASIC2.54□□□□□ -2
VCPP55072 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
VCPP55072 AC023043.2-201ENST00000589678 1026 ntBASIC2.54□□□□□ -2
VCPP55072 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.54□□□□□ -2
VCPP55072 Z94722.1-201ENST00000604328 474 ntBASIC2.54□□□□□ -2
VCPP55072 AL161798.1-201ENST00000604630 131 ntBASIC2.54□□□□□ -2
VCPP55072 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.54□□□□□ -2
VCPP55072 AC108479.2-201ENST00000617314 601 ntBASIC2.54□□□□□ -2
VCPP55072 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.54□□□□□ -2
VCPP55072 AC080100.1-201ENST00000624239 5356 ntBASIC2.54□□□□□ -2
VCPP55072 AC002543.1-201ENST00000299783 1954 ntBASIC2.54□□□□□ -2
VCPP55072 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.54□□□□□ -2
VCPP55072 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.53□□□□□ -2
VCPP55072 AC069528.2-201ENST00000624849 1991 ntBASIC2.53□□□□□ -2
VCPP55072 UBE2L2-201ENST00000254302 429 ntBASIC2.53□□□□□ -2
VCPP55072 U3.4-201ENST00000363352 213 ntBASIC2.53□□□□□ -2
VCPP55072 RNU4-91P-201ENST00000364778 135 ntBASIC2.53□□□□□ -2
VCPP55072 SNORA41-201ENST00000384675 132 ntBASIC2.53□□□□□ -2
VCPP55072 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.53□□□□□ -2
VCPP55072 RNU6-1328P-201ENST00000410938 106 ntBASIC2.53□□□□□ -2
VCPP55072 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.53□□□□□ -2
VCPP55072 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.53□□□□□ -2
VCPP55072 AC104651.1-201ENST00000427559 735 ntBASIC2.53□□□□□ -2
VCPP55072 MTND6P13-201ENST00000443510 523 ntBASIC2.53□□□□□ -2
VCPP55072 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.53□□□□□ -2
VCPP55072 RNA5SP269-201ENST00000459032 137 ntBASIC2.53□□□□□ -2
VCPP55072 RPL37P6-201ENST00000460682 294 ntBASIC2.53□□□□□ -2
VCPP55072 MTCO2P29-201ENST00000465212 189 ntBASIC2.53□□□□□ -2
VCPP55072 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.53□□□□□ -2
VCPP55072 MTND4P2-201ENST00000507767 1203 ntBASIC2.53□□□□□ -2
VCPP55072 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.53□□□□□ -2
VCPP55072 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.53□□□□□ -2
VCPP55072 MYL12BP1-201ENST00000569826 507 ntBASIC2.53□□□□□ -2
VCPP55072 MIR4498-201ENST00000577599 66 ntBASIC2.53□□□□□ -2
VCPP55072 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
VCPP55072 AL590229.1-201ENST00000603497 542 ntBASIC2.53□□□□□ -2
VCPP55072 AL645944.1-201ENST00000603857 493 ntBASIC2.53□□□□□ -2
VCPP55072 AC007363.1-201ENST00000604736 620 ntBASIC2.53□□□□□ -2
VCPP55072 AC013562.2-201ENST00000611632 603 ntBASIC2.53□□□□□ -2
VCPP55072 AC091304.9-201ENST00000612091 226 ntBASIC2.53□□□□□ -2
VCPP55072 MTND5P29-201ENST00000458676 1807 ntBASIC2.53□□□□□ -2
VCPP55072 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
VCPP55072 MTND5P6-201ENST00000422338 1798 ntBASIC2.52□□□□□ -2.01
VCPP55072 RNU5E-1-201ENST00000362477 120 ntBASIC2.52□□□□□ -2.01
VCPP55072 RNU6-512P-201ENST00000364438 103 ntBASIC2.52□□□□□ -2.01
VCPP55072 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.52□□□□□ -2.01
VCPP55072 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
VCPP55072 MIR524-201ENST00000385242 87 ntBASIC2.52□□□□□ -2.01
VCPP55072 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
VCPP55072 MIR888-201ENST00000401186 77 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms