Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.13□□□□□ -2.39
CLTCL1P53675 MTND2P9-201ENST00000422293 931 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.13□□□□□ -2.39
CLTCL1P53675 BET1P1-201ENST00000482276 359 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 RNA5SP137-201ENST00000516833 135 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.13□□□□□ -2.39
CLTCL1P53675 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.13□□□□□ -2.39
CLTCL1P53675 AL355877.2-201ENST00000603670 358 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AC010329.5-201ENST00000623497 2174 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 RNU6-1155P-201ENST00000363554 107 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 SNORA40.19-201ENST00000390846 128 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.13□□□□□ -2.39
CLTCL1P53675 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.13□□□□□ -2.39
CLTCL1P53675 AL163195.1-201ENST00000496941 348 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 SCARNA3-201ENST00000517097 143 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AC090666.1-201ENST00000578241 445 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AP003973.1-201ENST00000604639 691 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 AC004852.3-201ENST00000614131 326 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CLTCL1P53675 MIR6516-201ENST00000630554 81 ntBASIC0.13□□□□□ -2.39
CLTCL1P53675 RNU6-271P-201ENST00000363858 105 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.12□□□□□ -2.39
CLTCL1P53675 MICF-203ENST00000432679 129 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.12□□□□□ -2.39
CLTCL1P53675 AL356432.3-201ENST00000568952 465 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.12□□□□□ -2.39
CLTCL1P53675 MIR3609-201ENST00000582661 80 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.12□□□□□ -2.39
CLTCL1P53675 AC104763.3-201ENST00000613765 618 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 AL357075.2-201ENST00000614906 189 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 MIR8074-201ENST00000615081 81 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 AL391597.1-201ENST00000618707 694 ntBASIC0.12□□□□□ -2.39
CLTCL1P53675 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.11□□□□□ -2.39
CLTCL1P53675 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.11□□□□□ -2.39
CLTCL1P53675 PNPLA4P1-201ENST00000458328 305 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 AC118282.2-201ENST00000508739 374 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 AC108157.1-201ENST00000510511 539 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 AC087481.2-201ENST00000565492 330 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 CLIC4P2-201ENST00000601934 717 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 AL021879.1-201ENST00000611756 288 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.11□□□□□ -2.39
CLTCL1P53675 Z99571.1-201ENST00000636677 394 ntBASIC0.11□□□□□ -2.39
CLTCL1P53675 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.1□□□□□ -2.39
CLTCL1P53675 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CLTCL1P53675 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.1□□□□□ -2.39
CLTCL1P53675 Z77249.1-201ENST00000444622 1175 ntBASIC0.1□□□□□ -2.39
CLTCL1P53675 MTCYBP16-201ENST00000509187 1129 ntBASIC0.1□□□□□ -2.39
CLTCL1P53675 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.1□□□□□ -2.39
CLTCL1P53675 SCARNA11.3-201ENST00000517276 130 ntBASIC0.1□□□□□ -2.39
CLTCL1P53675 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.1□□□□□ -2.39
CLTCL1P53675 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.1□□□□□ -2.39
CLTCL1P53675 SNRPGP16-201ENST00000533275 226 ntBASIC0.1□□□□□ -2.39
CLTCL1P53675 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.1□□□□□ -2.39
CLTCL1P53675 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.1□□□□□ -2.39
CLTCL1P53675 AC096720.1-201ENST00000604441 183 ntBASIC0.1□□□□□ -2.39
CLTCL1P53675 Pinc.1-201ENST00000616452 154 ntBASIC0.1□□□□□ -2.39
CLTCL1P53675 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.1□□□□□ -2.39
CLTCL1P53675 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
CLTCL1P53675 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
CLTCL1P53675 HNRNPDP2-201ENST00000406475 478 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.09□□□□□ -2.39
CLTCL1P53675 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.09□□□□□ -2.39
CLTCL1P53675 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.09□□□□□ -2.39
CLTCL1P53675 AC114982.1-201ENST00000469402 321 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.09□□□□□ -2.39
CLTCL1P53675 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.09□□□□□ -2.39
CLTCL1P53675 AF213884.2-201ENST00000510417 903 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.09□□□□□ -2.39
CLTCL1P53675 MTND2P26-201ENST00000528255 1029 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.09□□□□□ -2.39
CLTCL1P53675 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.09□□□□□ -2.39
CLTCL1P53675 AP001330.4-201ENST00000604350 154 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AL138478.1-201ENST00000612252 832 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 MIR6134-201ENST00000617606 109 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AC099842.1-201ENST00000619919 596 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 AC005832.2-201ENST00000538921 1430 ntBASIC0.09□□□□□ -2.39
CLTCL1P53675 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.09□□□□□ -2.39
CLTCL1P53675 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CLTCL1P53675 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
CLTCL1P53675 MIR518D-201ENST00000385014 87 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 RNU2-21P-201ENST00000410368 188 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 AL714022.1-201ENST00000439897 151 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 RPEP5-201ENST00000441137 268 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 PGBD4P5-201ENST00000445958 426 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.09□□□□□ -2.4
CLTCL1P53675 snoU13.19-201ENST00000459148 104 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 AC116337.2-201ENST00000477662 156 ntBASIC0.09□□□□□ -2.4
CLTCL1P53675 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.09□□□□□ -2.4
CLTCL1P53675 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.09□□□□□ -2.4
CLTCL1P53675 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.09□□□□□ -2.4
CLTCL1P53675 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.09□□□□□ -2.4
CLTCL1P53675 MTND4P14-201ENST00000435799 1354 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 MIR411-201ENST00000362239 96 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 Y_RNA.136-201ENST00000363444 102 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 RNA5SP391-201ENST00000363456 119 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 SNORD1A-201ENST00000364968 72 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 MIR1250-201ENST00000408098 113 ntBASIC0.08□□□□□ -2.4
CLTCL1P53675 AC009310.1-201ENST00000414414 451 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms