Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TRBV1-201ENST00000476502 284 ntBASIC3.48□□□□□ -1.85
COPB1P53618 HIGD1AP13-201ENST00000509878 289 ntBASIC3.48□□□□□ -1.85
COPB1P53618 PHBP14-201ENST00000512887 367 ntBASIC3.48□□□□□ -1.85
COPB1P53618 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.48□□□□□ -1.85
COPB1P53618 RNU6-914P-201ENST00000516749 109 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AP000889.2-201ENST00000532684 490 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.48□□□□□ -1.85
COPB1P53618 MIR3921-201ENST00000577308 85 ntBASIC3.48□□□□□ -1.85
COPB1P53618 MIR3672-201ENST00000584290 82 ntBASIC3.48□□□□□ -1.85
COPB1P53618 POLR3GP2-201ENST00000588366 668 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AL670379.10-201ENST00000604330 253 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AP001330.4-201ENST00000604350 154 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AL670379.9-201ENST00000605428 253 ntBASIC3.48□□□□□ -1.85
COPB1P53618 AC073657.2-201ENST00000605661 303 ntBASIC3.48□□□□□ -1.85
COPB1P53618 uc_338.15-201ENST00000615470 191 ntBASIC3.48□□□□□ -1.85
COPB1P53618 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.48□□□□□ -1.85
COPB1P53618 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
COPB1P53618 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COPB1P53618 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COPB1P53618 SNORA31-201ENST00000362607 130 ntBASIC3.47□□□□□ -1.85
COPB1P53618 Y_RNA.212-201ENST00000364177 102 ntBASIC3.47□□□□□ -1.85
COPB1P53618 RNU6-1013P-201ENST00000384180 107 ntBASIC3.47□□□□□ -1.85
COPB1P53618 RNU6-434P-201ENST00000384376 107 ntBASIC3.47□□□□□ -1.85
COPB1P53618 MIR490-201ENST00000384865 128 ntBASIC3.47□□□□□ -1.85
COPB1P53618 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 NDUFB4P7-201ENST00000423198 363 ntBASIC3.47□□□□□ -1.85
COPB1P53618 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.47□□□□□ -1.85
COPB1P53618 RPS24P13-201ENST00000442520 397 ntBASIC3.47□□□□□ -1.85
COPB1P53618 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 AC007677.1-201ENST00000445757 515 ntBASIC3.47□□□□□ -1.85
COPB1P53618 MTCO1P29-201ENST00000496868 288 ntBASIC3.47□□□□□ -1.85
COPB1P53618 AC104136.1-201ENST00000512969 394 ntBASIC3.47□□□□□ -1.85
COPB1P53618 AC010265.1-201ENST00000513509 211 ntBASIC3.47□□□□□ -1.85
COPB1P53618 SCARNA15.2-201ENST00000516409 127 ntBASIC3.47□□□□□ -1.85
COPB1P53618 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 OR5D17P-201ENST00000531492 978 ntBASIC3.47□□□□□ -1.85
COPB1P53618 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.47□□□□□ -1.85
COPB1P53618 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
COPB1P53618 AC090132.2-201ENST00000615881 347 ntBASIC3.47□□□□□ -1.85
COPB1P53618 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.47□□□□□ -1.85
COPB1P53618 MTND1P37-201ENST00000636562 264 ntBASIC3.47□□□□□ -1.85
COPB1P53618 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COPB1P53618 AL079305.1-201ENST00000623159 3008 ntBASIC3.47□□□□□ -1.85
COPB1P53618 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COPB1P53618 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.85
COPB1P53618 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COPB1P53618 Y_RNA.419-201ENST00000384041 102 ntBASIC3.46□□□□□ -1.86
COPB1P53618 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
COPB1P53618 SNORA11.2-201ENST00000408318 127 ntBASIC3.46□□□□□ -1.86
COPB1P53618 MIR548K-201ENST00000408406 116 ntBASIC3.46□□□□□ -1.86
COPB1P53618 Z85995.1-201ENST00000415547 335 ntBASIC3.46□□□□□ -1.86
COPB1P53618 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.46□□□□□ -1.86
COPB1P53618 HMGB1P27-201ENST00000431429 603 ntBASIC3.46□□□□□ -1.86
COPB1P53618 RPS3AP52-201ENST00000435639 297 ntBASIC3.46□□□□□ -1.86
COPB1P53618 UQCRHP3-201ENST00000451503 251 ntBASIC3.46□□□□□ -1.86
COPB1P53618 Y_RNA.632-201ENST00000459189 102 ntBASIC3.46□□□□□ -1.86
COPB1P53618 RPL21P10-201ENST00000463521 490 ntBASIC3.46□□□□□ -1.86
COPB1P53618 MTND4P17-201ENST00000470444 350 ntBASIC3.46□□□□□ -1.86
COPB1P53618 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.46□□□□□ -1.86
COPB1P53618 RNA5SP471-201ENST00000516971 106 ntBASIC3.46□□□□□ -1.86
COPB1P53618 RNU6-1073P-201ENST00000517182 106 ntBASIC3.46□□□□□ -1.86
COPB1P53618 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.46□□□□□ -1.86
COPB1P53618 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.46□□□□□ -1.86
COPB1P53618 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.46□□□□□ -1.86
COPB1P53618 AP000763.2-201ENST00000540641 163 ntBASIC3.46□□□□□ -1.86
COPB1P53618 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.46□□□□□ -1.86
COPB1P53618 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.46□□□□□ -1.86
COPB1P53618 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.46□□□□□ -1.86
COPB1P53618 AC106782.4-201ENST00000568264 210 ntBASIC3.46□□□□□ -1.86
COPB1P53618 AC016727.1-205ENST00000605437 569 ntBASIC3.46□□□□□ -1.86
COPB1P53618 AC107294.3-201ENST00000609211 526 ntBASIC3.46□□□□□ -1.86
COPB1P53618 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.46□□□□□ -1.86
COPB1P53618 U2.17-201ENST00000611454 95 ntBASIC3.46□□□□□ -1.86
COPB1P53618 FAM157A-202ENST00000615155 405 ntBASIC3.46□□□□□ -1.86
COPB1P53618 AL355365.1-201ENST00000616480 294 ntBASIC3.46□□□□□ -1.86
COPB1P53618 AL160413.1-201ENST00000622780 310 ntBASIC3.46□□□□□ -1.86
COPB1P53618 AC022418.1-201ENST00000624118 445 ntBASIC3.46□□□□□ -1.86
COPB1P53618 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COPB1P53618 AL672296.1-201ENST00000427780 2158 ntBASIC3.46□□□□□ -1.86
COPB1P53618 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.46□□□□□ -1.86
COPB1P53618 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
COPB1P53618 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COPB1P53618 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COPB1P53618 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.45□□□□□ -1.86
COPB1P53618 RNU6-1252P-201ENST00000363054 104 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RNA5SP189-201ENST00000364920 115 ntBASIC3.45□□□□□ -1.86
COPB1P53618 SNORA4.3-201ENST00000365564 137 ntBASIC3.45□□□□□ -1.86
COPB1P53618 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COPB1P53618 Y_RNA.387-201ENST00000383918 102 ntBASIC3.45□□□□□ -1.86
COPB1P53618 Y_RNA.394-201ENST00000383942 103 ntBASIC3.45□□□□□ -1.86
COPB1P53618 MIR591-201ENST00000385290 95 ntBASIC3.45□□□□□ -1.86
COPB1P53618 VN1R36P-201ENST00000414936 291 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RPLP0P7-201ENST00000416050 667 ntBASIC3.45□□□□□ -1.86
COPB1P53618 RPL7P10-201ENST00000417407 739 ntBASIC3.45□□□□□ -1.86
COPB1P53618 SAR1AP4-201ENST00000429225 591 ntBASIC3.45□□□□□ -1.86
COPB1P53618 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.45□□□□□ -1.86
COPB1P53618 CYCSP32-201ENST00000440548 321 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms