Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RN7SKP83-201ENST00000516512 178 ntBASIC3.56□□□□□ -1.84
HMGA2P52926 ERHP1-201ENST00000523006 310 ntBASIC3.56□□□□□ -1.84
HMGA2P52926 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA2P52926 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGA2P52926 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGA2P52926 AC098826.3-201ENST00000603823 466 ntBASIC3.56□□□□□ -1.84
HMGA2P52926 AL158032.1-201ENST00000605401 106 ntBASIC3.56□□□□□ -1.84
HMGA2P52926 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.56□□□□□ -1.84
HMGA2P52926 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA2P52926 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGA2P52926 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
HMGA2P52926 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
HMGA2P52926 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGA2P52926 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.55□□□□□ -1.84
HMGA2P52926 MIR383-201ENST00000362257 73 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 Y_RNA.127-201ENST00000363386 109 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RN7SKP103-201ENST00000363848 320 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNU6-595P-201ENST00000363944 107 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 Y_RNA.215-201ENST00000364204 112 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNU6-290P-201ENST00000365212 101 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 Y_RNA.488-201ENST00000384403 102 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNU6-1035P-201ENST00000384477 107 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 MIR569-201ENST00000385228 96 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 MIR708-201ENST00000390708 88 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNU11-4P-201ENST00000391149 133 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 ENSAP1-201ENST00000392855 326 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNA5SP111-201ENST00000411386 101 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 MTCO1P39-201ENST00000426148 480 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 EZH2P1-201ENST00000431167 291 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGA2P52926 AC016925.1-201ENST00000458303 298 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 U8.22-201ENST00000459141 133 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AC022034.3-201ENST00000471393 478 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AL132838.2-201ENST00000492041 314 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RPL30P11-201ENST00000495304 339 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AC093767.1-201ENST00000504523 156 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNU6-1333P-201ENST00000516162 93 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 SNORD116-25-201ENST00000516517 92 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.55□□□□□ -1.84
HMGA2P52926 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGA2P52926 TRAV32-201ENST00000553993 340 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AL442163.3-201ENST00000554110 156 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AC023824.2-201ENST00000566185 400 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 HNRNPCP4-201ENST00000571636 900 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 MIR5696-201ENST00000578474 85 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RN7SL600P-201ENST00000581811 299 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGA2P52926 AL162424.1-201ENST00000602325 221 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 RNU6-85P-201ENST00000605989 107 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AC114781.5-201ENST00000615297 108 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 AL023881.1-201ENST00000621088 301 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HMGA2P52926 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HMGA2P52926 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
HMGA2P52926 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGA2P52926 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGA2P52926 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
HMGA2P52926 XIAPP3-201ENST00000312918 795 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 Y_RNA.71-201ENST00000362892 104 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 RNA5SP443-201ENST00000363083 132 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 RNU6-371P-201ENST00000364283 108 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 U8.8-201ENST00000365399 135 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA2P52926 Y_RNA.435-201ENST00000384095 112 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 RNU6-45P-201ENST00000384471 107 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 RNU6-790P-201ENST00000384479 105 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGA2P52926 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HMGA2P52926 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGA2P52926 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.54□□□□□ -1.84
HMGA2P52926 MTCO1P5-201ENST00000433573 344 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.54□□□□□ -1.84
HMGA2P52926 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.54□□□□□ -1.84
HMGA2P52926 RNU6-1234P-201ENST00000516877 103 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 RNU6-971P-201ENST00000516920 106 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.54□□□□□ -1.84
HMGA2P52926 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.54□□□□□ -1.84
HMGA2P52926 AC091167.4-201ENST00000605079 184 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 AC241377.1-201ENST00000619797 406 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 AL589994.2-201ENST00000621124 579 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 AC011944.2-201ENST00000624440 683 ntBASIC3.54□□□□□ -1.84
HMGA2P52926 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HMGA2P52926 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.53□□□□□ -1.84
HMGA2P52926 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HMGA2P52926 AC110774.1-201ENST00000623567 2018 ntBASIC3.53□□□□□ -1.84
HMGA2P52926 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HMGA2P52926 AC245100.2-201ENST00000454544 1679 ntBASIC3.53□□□□□ -1.84
HMGA2P52926 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms