Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 AL132838.2-201ENST00000492041 314 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 AC139453.3-201ENST00000493276 369 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.94□□□□□ -1.46
PRIM1P49642 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.94□□□□□ -1.46
PRIM1P49642 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PRIM1P49642 AL161713.1-201ENST00000555538 145 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.94□□□□□ -1.46
PRIM1P49642 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.94□□□□□ -1.46
PRIM1P49642 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.94□□□□□ -1.46
PRIM1P49642 AC006272.2-201ENST00000594725 163 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 AC005176.2-201ENST00000596933 147 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 AL359881.1-201ENST00000602916 267 ntBASIC5.94□□□□□ -1.46
PRIM1P49642 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.94□□□□□ -1.46
PRIM1P49642 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.94□□□□□ -1.46
PRIM1P49642 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PRIM1P49642 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PRIM1P49642 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PRIM1P49642 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.94□□□□□ -1.46
PRIM1P49642 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PRIM1P49642 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PRIM1P49642 RNU4-84P-201ENST00000364200 139 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 RNU4-56P-201ENST00000364700 142 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.93□□□□□ -1.46
PRIM1P49642 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.93□□□□□ -1.46
PRIM1P49642 SNORA67.7-201ENST00000516664 135 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 CYCSP23-201ENST00000519781 313 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.93□□□□□ -1.46
PRIM1P49642 AC055872.1-201ENST00000570978 278 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 MIR4782-201ENST00000577987 79 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 AC005828.6-201ENST00000606610 232 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 Y_RNA.778-201ENST00000620203 90 ntBASIC5.93□□□□□ -1.46
PRIM1P49642 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PRIM1P49642 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
PRIM1P49642 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRIM1P49642 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PRIM1P49642 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 MAPK10-349ENST00000641767 3661 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PRIM1P49642 SPRR2C-201ENST00000290702 219 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 Y_RNA.75-201ENST00000362927 97 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 RNU6-741P-201ENST00000383889 107 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 RNU6-72P-201ENST00000384285 79 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 SDHCP2-201ENST00000398565 501 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 AL590383.1-201ENST00000428602 75 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.92□□□□□ -1.46
PRIM1P49642 MRPS10P1-201ENST00000448483 130 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 RPS27AP9-201ENST00000477681 438 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.92□□□□□ -1.46
PRIM1P49642 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.92□□□□□ -1.46
PRIM1P49642 RNU6-572P-201ENST00000516724 80 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.92□□□□□ -1.46
PRIM1P49642 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.92□□□□□ -1.46
PRIM1P49642 AC005868.1-201ENST00000536421 331 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 TRAV8-5-201ENST00000537369 341 ntBASIC5.92□□□□□ -1.46
PRIM1P49642 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.92□□□□□ -1.46
PRIM1P49642 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
PRIM1P49642 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRIM1P49642 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PRIM1P49642 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
PRIM1P49642 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
PRIM1P49642 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
PRIM1P49642 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PRIM1P49642 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PRIM1P49642 MIR372-201ENST00000362225 67 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 RNA5SP361-201ENST00000362686 118 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 RNU6-653P-201ENST00000363074 106 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 RNU6-527P-201ENST00000363425 104 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 Y_RNA.319-201ENST00000365138 92 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 RNU6-281P-201ENST00000384212 103 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 MIR153-1-201ENST00000384914 90 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 SNORA40-201ENST00000388090 126 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 Z85995.1-201ENST00000415547 335 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 AL035461.1-201ENST00000421490 332 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 AC098614.2-201ENST00000426040 255 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 MLLT10P2-201ENST00000506434 249 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.91□□□□□ -1.46
PRIM1P49642 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.91□□□□□ -1.46
PRIM1P49642 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 AP001005.3-201ENST00000622049 129 ntBASIC5.91□□□□□ -1.46
PRIM1P49642 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.91□□□□□ -1.46
PRIM1P49642 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.91□□□□□ -1.46
PRIM1P49642 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PRIM1P49642 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PRIM1P49642 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms