Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.32□□□□□ -2.2
CDC34P49427 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.32□□□□□ -2.2
CDC34P49427 DDX43P2-201ENST00000604753 1354 ntBASIC1.32□□□□□ -2.2
CDC34P49427 MTND5P33-201ENST00000571250 1450 ntBASIC1.31□□□□□ -2.2
CDC34P49427 ZNF29P-201ENST00000225587 168 ntBASIC1.31□□□□□ -2.2
CDC34P49427 RNU6-1164P-201ENST00000364428 107 ntBASIC1.31□□□□□ -2.2
CDC34P49427 RNU6-546P-201ENST00000383991 107 ntBASIC1.31□□□□□ -2.2
CDC34P49427 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CDC34P49427 BTF3L4P2-201ENST00000392798 346 ntBASIC1.31□□□□□ -2.2
CDC34P49427 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC34P49427 RNU2-32P-201ENST00000411193 191 ntBASIC1.31□□□□□ -2.2
CDC34P49427 MTND4P3-201ENST00000417829 541 ntBASIC1.31□□□□□ -2.2
CDC34P49427 MTCO3P46-201ENST00000425787 232 ntBASIC1.31□□□□□ -2.2
CDC34P49427 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC092017.2-201ENST00000427600 362 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC34P49427 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.31□□□□□ -2.2
CDC34P49427 AC003989.2-201ENST00000440224 169 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC34P49427 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.31□□□□□ -2.2
CDC34P49427 EEF1E1P1-201ENST00000446998 430 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC017099.1-201ENST00000448261 1028 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AP000542.1-201ENST00000448473 371 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.31□□□□□ -2.2
CDC34P49427 RPS29P11-201ENST00000496507 171 ntBASIC1.31□□□□□ -2.2
CDC34P49427 RPL38P4-201ENST00000502376 214 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC34P49427 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.31□□□□□ -2.2
CDC34P49427 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CDC34P49427 RNU2-53P-201ENST00000516257 147 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AP006587.4-201ENST00000526053 529 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC087894.1-201ENST00000538359 518 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
CDC34P49427 AC074050.1-201ENST00000563247 211 ntBASIC1.31□□□□□ -2.2
CDC34P49427 MIR3162-201ENST00000581818 82 ntBASIC1.31□□□□□ -2.2
CDC34P49427 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC34P49427 AC090970.3-201ENST00000612566 866 ntBASIC1.31□□□□□ -2.2
CDC34P49427 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.31□□□□□ -2.2
CDC34P49427 AL136313.1-201ENST00000624804 202 ntBASIC1.31□□□□□ -2.2
CDC34P49427 RNU6-529P-201ENST00000363383 104 ntBASIC1.3□□□□□ -2.2
CDC34P49427 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC34P49427 RNU6-224P-201ENST00000384055 107 ntBASIC1.3□□□□□ -2.2
CDC34P49427 MIR9-3-201ENST00000385084 90 ntBASIC1.3□□□□□ -2.2
CDC34P49427 RNU1-78P-201ENST00000391248 165 ntBASIC1.3□□□□□ -2.2
CDC34P49427 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC34P49427 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CDC34P49427 FTH1P15-201ENST00000406984 280 ntBASIC1.3□□□□□ -2.2
CDC34P49427 MIR1294-201ENST00000408503 142 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC34P49427 AC245517.4-201ENST00000448601 281 ntBASIC1.3□□□□□ -2.2
CDC34P49427 PAXBP1P1-201ENST00000449315 447 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC34P49427 FAM92A1P2-202ENST00000504766 877 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC008837.2-201ENST00000513076 418 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC117532.1-201ENST00000514638 323 ntBASIC1.3□□□□□ -2.2
CDC34P49427 RNU6-143P-201ENST00000516942 93 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.3□□□□□ -2.2
CDC34P49427 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC34P49427 AP003392.2-201ENST00000527269 208 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC084851.1-201ENST00000529105 249 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC022616.8-201ENST00000533569 253 ntBASIC1.3□□□□□ -2.2
CDC34P49427 SUB1P3-201ENST00000564581 315 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.3□□□□□ -2.2
CDC34P49427 AC006270.3-201ENST00000605967 1036 ntBASIC1.3□□□□□ -2.2
CDC34P49427 AC068944.2-201ENST00000610373 403 ntBASIC1.3□□□□□ -2.2
CDC34P49427 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
CDC34P49427 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.3□□□□□ -2.2
CDC34P49427 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDC34P49427 AP000648.3-201ENST00000623539 4507 ntBASIC1.29□□□□□ -2.2
CDC34P49427 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
CDC34P49427 MIR208A-201ENST00000362287 71 ntBASIC1.29□□□□□ -2.2
CDC34P49427 SNORA70.4-201ENST00000365509 134 ntBASIC1.29□□□□□ -2.2
CDC34P49427 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CDC34P49427 MIR1284-201ENST00000408337 120 ntBASIC1.29□□□□□ -2.2
CDC34P49427 RNA5SP100-201ENST00000410903 110 ntBASIC1.29□□□□□ -2.2
CDC34P49427 RNA5SP59-201ENST00000410922 110 ntBASIC1.29□□□□□ -2.2
CDC34P49427 AC013262.1-201ENST00000426710 252 ntBASIC1.29□□□□□ -2.2
CDC34P49427 RPL23AP76-201ENST00000441860 458 ntBASIC1.29□□□□□ -2.2
CDC34P49427 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CDC34P49427 AL590365.1-201ENST00000450788 243 ntBASIC1.29□□□□□ -2.2
CDC34P49427 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC34P49427 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.29□□□□□ -2.2
CDC34P49427 RPL39P36-201ENST00000490784 156 ntBASIC1.29□□□□□ -2.2
CDC34P49427 ANXA2P1-201ENST00000505539 926 ntBASIC1.29□□□□□ -2.2
CDC34P49427 MTND4P2-201ENST00000507767 1203 ntBASIC1.29□□□□□ -2.2
CDC34P49427 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.29□□□□□ -2.2
CDC34P49427 AC025465.3-201ENST00000510570 311 ntBASIC1.29□□□□□ -2.2
CDC34P49427 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.29□□□□□ -2.2
CDC34P49427 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC34P49427 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC34P49427 AL136520.1-202ENST00000555494 763 ntBASIC1.29□□□□□ -2.2
CDC34P49427 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC34P49427 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC34P49427 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.29□□□□□ -2.2
CDC34P49427 BNIP3P9-201ENST00000603714 553 ntBASIC1.29□□□□□ -2.2
CDC34P49427 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.29□□□□□ -2.2
CDC34P49427 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.29□□□□□ -2.2
CDC34P49427 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.29□□□□□ -2.2
CDC34P49427 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.29□□□□□ -2.2
CDC34P49427 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms