Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AP003355.3-201ENST00000623465 114 ntBASIC3.64□□□□□ -1.83
SLC6A4P31645 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SLC6A4P31645 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
SLC6A4P31645 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SLC6A4P31645 MTCO1P12-201ENST00000414273 1543 ntBASIC3.64□□□□□ -1.83
SLC6A4P31645 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.64□□□□□ -1.83
SLC6A4P31645 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.64□□□□□ -1.83
SLC6A4P31645 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A4P31645 AC022336.2-201ENST00000568966 2538 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 SNORD62.1-201ENST00000362541 86 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 RNU4-35P-201ENST00000362588 141 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 RNU6-283P-201ENST00000364788 107 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 Y_RNA.324-201ENST00000365165 102 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 Y_RNA.395-201ENST00000383945 109 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 Y_RNA.422-201ENST00000384054 114 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 SNORD17-201ENST00000390930 237 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 NDUFB4P4-201ENST00000404822 243 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 U3.39-201ENST00000408569 239 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 RNU2-3P-201ENST00000410144 191 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 RNU2-37P-201ENST00000410695 177 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 RPL7P37-201ENST00000425095 738 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.63□□□□□ -1.83
SLC6A4P31645 PIGFP3-201ENST00000441918 722 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 Y_RNA.631-201ENST00000459607 101 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AC008155.2-201ENST00000464337 397 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 RPL30P5-201ENST00000494923 336 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 MTCYBP40-201ENST00000509390 1135 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AC005741.1-201ENST00000511094 432 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 TRAV37-201ENST00000553906 342 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 AC020661.2-201ENST00000560114 134 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 MIR4644-201ENST00000579929 84 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 MIR3690-201ENST00000580266 75 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 OR1M4P-201ENST00000589199 287 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AP000787.2-201ENST00000604432 568 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 AC106900.2-201ENST00000604994 317 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 MIR6128-201ENST00000615528 109 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 PISRT1.1-201ENST00000616930 107 ntBASIC3.63□□□□□ -1.83
SLC6A4P31645 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A4P31645 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A4P31645 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC6A4P31645 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SLC6A4P31645 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SLC6A4P31645 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.63□□□□□ -1.83
SLC6A4P31645 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A4P31645 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A4P31645 OTUD4P1-201ENST00000237841 3067 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC6A4P31645 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 AP001486.2-201ENST00000561652 5113 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A4P31645 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 AC090740.1-201ENST00000623193 2262 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 RNU6-95P-201ENST00000384697 107 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 MIR559-201ENST00000385188 96 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 RPL5P18-201ENST00000406671 891 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 CYCSP33-201ENST00000414485 327 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A4P31645 UBE2D3P2-201ENST00000424409 445 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A4P31645 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A4P31645 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC6A4P31645 ANP32BP2-201ENST00000454525 545 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 RPL9P32-201ENST00000464118 620 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 KC877373.1-201ENST00000479066 408 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 AC011005.2-201ENST00000487324 359 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 Y_RNA.708-201ENST00000516950 96 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 AL645944.1-201ENST00000603857 493 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 NUTF2P8-201ENST00000604593 363 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 RNU6-85P-201ENST00000605989 107 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A4P31645 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 AL049781.1-201ENST00000623195 3585 ntBASIC3.62□□□□□ -1.83
SLC6A4P31645 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC6A4P31645 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC6A4P31645 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.62□□□□□ -1.83
SLC6A4P31645 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC6A4P31645 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SLC6A4P31645 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
SLC6A4P31645 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SLC6A4P31645 AC118273.1-201ENST00000525324 3006 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 HSPA8P1-201ENST00000425843 1833 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.61□□□□□ -1.83
SLC6A4P31645 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC6A4P31645 Y_RNA.111-201ENST00000363248 100 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 Y_RNA.197-201ENST00000364004 102 ntBASIC3.61□□□□□ -1.83
SLC6A4P31645 Y_RNA.202-201ENST00000364083 110 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms