Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 RPS27AP8-201ENST00000452665 445 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.14□□□□□ -2.07
HOXA9P31269 CKS1BP2-201ENST00000497342 240 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC112204.1-201ENST00000502591 103 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXA9P31269 RNU6-390P-201ENST00000516259 103 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 AC060788.1-201ENST00000521318 469 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXA9P31269 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXA9P31269 AC011494.1-201ENST00000596454 237 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 DPPA3P3-201ENST00000603842 430 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC138749.5-201ENST00000611461 208 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HOXA9P31269 AC116165.2-201ENST00000616705 206 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AL049641.1-201ENST00000441055 1948 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 CKAP2P1-201ENST00000555477 2049 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 MTND4P4-201ENST00000439033 1366 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXA9P31269 RNU4-1-201ENST00000363925 141 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 RNY4P16-201ENST00000364768 94 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 RNY3P13-201ENST00000365542 102 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 MT-TH-201ENST00000387441 69 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 RNU6-278P-201ENST00000390945 109 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXA9P31269 AC244035.1-201ENST00000430042 390 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXA9P31269 RPL22P17-201ENST00000438729 315 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 PIGFP3-201ENST00000441918 722 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AL031659.1-201ENST00000447075 539 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 RPS27P21-201ENST00000486977 252 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXA9P31269 RNA5SP458-201ENST00000516188 119 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 RN7SKP219-201ENST00000516825 296 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AP005902.1-201ENST00000521358 186 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXA9P31269 AC012414.6-201ENST00000568241 401 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.13□□□□□ -2.07
HOXA9P31269 AP000860.1-201ENST00000605250 559 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC009090.3-201ENST00000616553 565 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC009878.1-201ENST00000621819 340 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC091931.1-201ENST00000623488 728 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC099654.13-201ENST00000639774 207 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.13□□□□□ -2.07
HOXA9P31269 AC010329.5-201ENST00000623497 2174 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 RNU6-14P-201ENST00000384630 106 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 SNORA26.8-201ENST00000391306 124 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXA9P31269 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXA9P31269 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC007919.1-201ENST00000429380 217 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 MED14P1-201ENST00000430517 648 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXA9P31269 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.12□□□□□ -2.07
HOXA9P31269 DDX3P2-201ENST00000446138 111 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC108059.3-201ENST00000456388 214 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 AC107626.1-201ENST00000471084 183 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 SUMO2P6-201ENST00000505273 288 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 AC023141.11-201ENST00000508864 202 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 FABP5P5-201ENST00000515537 406 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 RN7SKP258-201ENST00000517151 304 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC093012.1-202ENST00000549403 582 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 ARL2BPP2-201ENST00000550907 489 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.12□□□□□ -2.07
HOXA9P31269 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA9P31269 HMGN1P30-201ENST00000589286 268 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 AC090970.3-201ENST00000612566 866 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 uc_338.12-201ENST00000616344 181 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 YWHAEP7-203ENST00000622054 312 ntBASIC2.12□□□□□ -2.07
HOXA9P31269 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HOXA9P31269 AC092104.1-201ENST00000497346 1441 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXA9P31269 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 RNU6-511P-201ENST00000363496 107 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 RNU5F-7P-201ENST00000363696 115 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 RNU6-1284P-201ENST00000363701 100 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 RNU6-741P-201ENST00000383889 107 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 RNU6-217P-201ENST00000384164 104 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 AL021407.1-201ENST00000404531 386 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 RNU2-33P-201ENST00000410344 192 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.11□□□□□ -2.07
HOXA9P31269 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXA9P31269 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXA9P31269 EIF4EP4-201ENST00000424916 578 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.11□□□□□ -2.07
HOXA9P31269 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.11□□□□□ -2.07
HOXA9P31269 AC010153.1-201ENST00000432862 727 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 Z82210.1-201ENST00000440037 231 ntBASIC2.11□□□□□ -2.07
HOXA9P31269 GPM6BP3-201ENST00000442797 145 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms