Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX1P22670 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.98□□□□□ -1.61
RFX1P22670 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX1P22670 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX1P22670 Y_RNA.105-201ENST00000363182 111 ntBASIC4.98□□□□□ -1.61
RFX1P22670 SNORD113.2-201ENST00000364166 89 ntBASIC4.98□□□□□ -1.61
RFX1P22670 SNORA70F-201ENST00000384142 135 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RNY3P4-201ENST00000384428 101 ntBASIC4.98□□□□□ -1.61
RFX1P22670 Y_RNA.562-201ENST00000384695 113 ntBASIC4.98□□□□□ -1.61
RFX1P22670 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RFX1P22670 RPL21P75-201ENST00000396599 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RPL21P28-201ENST00000401418 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RNU6-1245P-201ENST00000411130 106 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AL358453.1-201ENST00000422522 250 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AL590556.1-201ENST00000423231 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX1P22670 AC007389.2-201ENST00000434630 306 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RPL23AP22-201ENST00000437556 453 ntBASIC4.98□□□□□ -1.61
RFX1P22670 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX1P22670 HMGN2P16-201ENST00000456802 261 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RPL21P11-201ENST00000461458 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RPL21P39-201ENST00000463605 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC087190.1-201ENST00000484462 480 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC107032.1-201ENST00000485945 480 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC132942.1-201ENST00000486753 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC093591.1-201ENST00000491435 481 ntBASIC4.98□□□□□ -1.61
RFX1P22670 RPL21P16-201ENST00000495531 483 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC097462.2-201ENST00000504623 481 ntBASIC4.98□□□□□ -1.61
RFX1P22670 ANXA2P1-201ENST00000505539 926 ntBASIC4.98□□□□□ -1.61
RFX1P22670 MTND1P19-201ENST00000511780 315 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AP002770.2-201ENST00000543613 532 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX1P22670 AL355877.2-201ENST00000603670 358 ntBASIC4.98□□□□□ -1.61
RFX1P22670 ARF4P1-201ENST00000605447 541 ntBASIC4.98□□□□□ -1.61
RFX1P22670 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.98□□□□□ -1.61
RFX1P22670 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX1P22670 AC096772.1-201ENST00000609146 564 ntBASIC4.98□□□□□ -1.61
RFX1P22670 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.98□□□□□ -1.61
RFX1P22670 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX1P22670 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RFX1P22670 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RFX1P22670 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFX1P22670 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RFX1P22670 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
RFX1P22670 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 AC002546.1-201ENST00000588041 2504 ntBASIC4.97□□□□□ -1.61
RFX1P22670 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
RFX1P22670 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.97□□□□□ -1.61
RFX1P22670 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 RNU1-20P-201ENST00000363314 162 ntBASIC4.97□□□□□ -1.61
RFX1P22670 SNORD115-32-201ENST00000364079 82 ntBASIC4.97□□□□□ -1.61
RFX1P22670 RNU6-1286P-201ENST00000383871 107 ntBASIC4.97□□□□□ -1.61
RFX1P22670 ELOCP19-201ENST00000411919 318 ntBASIC4.97□□□□□ -1.61
RFX1P22670 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.97□□□□□ -1.61
RFX1P22670 FTH1P6-201ENST00000430768 320 ntBASIC4.97□□□□□ -1.61
RFX1P22670 RNU7-87P-201ENST00000459343 62 ntBASIC4.97□□□□□ -1.61
RFX1P22670 RPS27AP10-201ENST00000496103 208 ntBASIC4.97□□□□□ -1.61
RFX1P22670 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.97□□□□□ -1.61
RFX1P22670 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.97□□□□□ -1.61
RFX1P22670 AC067942.3-201ENST00000512025 362 ntBASIC4.97□□□□□ -1.61
RFX1P22670 RNU6-570P-201ENST00000517051 105 ntBASIC4.97□□□□□ -1.61
RFX1P22670 AP005019.3-201ENST00000620418 560 ntBASIC4.97□□□□□ -1.61
RFX1P22670 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RFX1P22670 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RFX1P22670 ZNF137P-201ENST00000456718 1920 ntBASIC4.97□□□□□ -1.61
RFX1P22670 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RFX1P22670 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.96□□□□□ -1.61
RFX1P22670 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RFX1P22670 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
RFX1P22670 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.96□□□□□ -1.62
RFX1P22670 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RFX1P22670 RNU6-968P-201ENST00000384076 107 ntBASIC4.96□□□□□ -1.62
RFX1P22670 SNORA1.3-201ENST00000384676 136 ntBASIC4.96□□□□□ -1.62
RFX1P22670 MIR195-201ENST00000385194 87 ntBASIC4.96□□□□□ -1.62
RFX1P22670 RNA5SP372-201ENST00000390836 115 ntBASIC4.96□□□□□ -1.62
RFX1P22670 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RFX1P22670 RNU6-121P-201ENST00000410525 99 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC009237.10-201ENST00000414112 510 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC074117.2-201ENST00000417130 397 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC139712.2-201ENST00000424302 339 ntBASIC4.96□□□□□ -1.62
RFX1P22670 RPL23AP95-201ENST00000426806 265 ntBASIC4.96□□□□□ -1.62
RFX1P22670 SDAD1P3-201ENST00000427380 333 ntBASIC4.96□□□□□ -1.62
RFX1P22670 RPS6P12-201ENST00000432491 726 ntBASIC4.96□□□□□ -1.62
RFX1P22670 CYCSP32-201ENST00000440548 321 ntBASIC4.96□□□□□ -1.62
RFX1P22670 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.96□□□□□ -1.62
RFX1P22670 SCARNA10-201ENST00000459255 330 ntBASIC4.96□□□□□ -1.62
RFX1P22670 RPL39P38-201ENST00000467018 153 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC011276.1-201ENST00000469688 323 ntBASIC4.96□□□□□ -1.62
RFX1P22670 RPL23AP75-201ENST00000491601 451 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC010469.2-201ENST00000496412 480 ntBASIC4.96□□□□□ -1.62
RFX1P22670 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.96□□□□□ -1.62
RFX1P22670 RNU6-1023P-201ENST00000516137 106 ntBASIC4.96□□□□□ -1.62
RFX1P22670 SNORA31.9-201ENST00000516429 84 ntBASIC4.96□□□□□ -1.62
RFX1P22670 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.96□□□□□ -1.62
RFX1P22670 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms