Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.69□□□□□ -1.66
LMNB1P20700 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.69□□□□□ -1.66
LMNB1P20700 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
LMNB1P20700 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMNB1P20700 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMNB1P20700 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMNB1P20700 Y_RNA.176-201ENST00000363815 109 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 RNU6-173P-201ENST00000364215 104 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 Y_RNA.389-201ENST00000383924 113 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 Y_RNA.512-201ENST00000384518 102 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LMNB1P20700 RNU6-823P-201ENST00000391042 103 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 RNU2-23P-201ENST00000410545 195 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AL592148.1-201ENST00000413568 445 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.69□□□□□ -1.66
LMNB1P20700 DPH3P2-201ENST00000422618 250 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 CBX3P6-201ENST00000430257 527 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 MYL8P-204ENST00000431574 518 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AL353997.1-201ENST00000432936 108 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.69□□□□□ -1.66
LMNB1P20700 UBE2DNL-203ENST00000474922 222 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 RN7SL271P-201ENST00000487601 295 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AC022447.4-201ENST00000504053 364 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AC026784.1-201ENST00000507986 352 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.69□□□□□ -1.66
LMNB1P20700 AC022695.1-201ENST00000522089 237 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AC023442.1-201ENST00000531247 422 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AL161670.1-201ENST00000554348 137 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.69□□□□□ -1.66
LMNB1P20700 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.69□□□□□ -1.66
LMNB1P20700 SUB1P3-201ENST00000564581 315 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 CYP4A43P-201ENST00000568156 121 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.69□□□□□ -1.66
LMNB1P20700 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.69□□□□□ -1.66
LMNB1P20700 AC107294.1-201ENST00000609524 467 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 MIR8057-201ENST00000620957 69 ntBASIC4.69□□□□□ -1.66
LMNB1P20700 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.69□□□□□ -1.66
LMNB1P20700 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.69□□□□□ -1.66
LMNB1P20700 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LMNB1P20700 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMNB1P20700 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.69□□□□□ -1.66
LMNB1P20700 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
LMNB1P20700 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMNB1P20700 ZNF962P-201ENST00000443465 3140 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 AC004925.1-201ENST00000624256 2706 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMNB1P20700 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMNB1P20700 RNU6-238P-201ENST00000363313 106 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 RNU6-702P-201ENST00000364982 107 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 RNU6-1318P-201ENST00000365389 103 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LMNB1P20700 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.68□□□□□ -1.66
LMNB1P20700 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.68□□□□□ -1.66
LMNB1P20700 HLA-N-201ENST00000437516 135 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 AC112492.4-201ENST00000456549 352 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 AC008155.2-201ENST00000464337 397 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 RN7SL283P-201ENST00000489055 303 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.68□□□□□ -1.66
LMNB1P20700 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.68□□□□□ -1.66
LMNB1P20700 MIR892C-201ENST00000516410 77 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 RNU6-1256P-201ENST00000516539 103 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 RNU6-307P-201ENST00000516743 106 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 RNU6-264P-201ENST00000517134 104 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 CBX3P8-201ENST00000532412 525 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.68□□□□□ -1.66
LMNB1P20700 AC004024.1-201ENST00000549244 247 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.68□□□□□ -1.66
LMNB1P20700 AL606534.2-204ENST00000635008 178 ntBASIC4.68□□□□□ -1.66
LMNB1P20700 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LMNB1P20700 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMNB1P20700 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
LMNB1P20700 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LMNB1P20700 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.67□□□□□ -1.66
LMNB1P20700 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LMNB1P20700 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
LMNB1P20700 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.67□□□□□ -1.66
LMNB1P20700 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LMNB1P20700 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
LMNB1P20700 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.67□□□□□ -1.66
LMNB1P20700 DEFB108F-201ENST00000344638 222 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 Y_RNA.33-201ENST00000362591 102 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 Y_RNA.106-201ENST00000363189 100 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LMNB1P20700 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LMNB1P20700 U3.26-201ENST00000391236 204 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 RNU6-1025P-201ENST00000410629 104 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.67□□□□□ -1.66
LMNB1P20700 RPS15AP6-201ENST00000420703 385 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 CYCSP4-201ENST00000429682 331 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 AC069285.2-201ENST00000440210 275 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 RPS24P6-201ENST00000452670 400 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 FABP5P15-201ENST00000453566 214 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 AP000873.1-201ENST00000463987 400 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 FO393415.2-201ENST00000480085 343 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 SCARNA15.2-201ENST00000516409 127 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 IGKV2D-23-201ENST00000518179 286 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 AP002404.1-201ENST00000532005 451 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 AC069240.1-201ENST00000548774 375 ntBASIC4.67□□□□□ -1.66
LMNB1P20700 MIR3668-201ENST00000582138 75 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms