Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU5F-8P-201ENST00000515941 111 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RN7SKP258-201ENST00000517151 304 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 SNORA31.23-201ENST00000517219 133 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 OR4R1P-201ENST00000529879 463 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A2P08572 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A2P08572 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A2P08572 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A2P08572 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A2P08572 AL360085.1-201ENST00000604713 532 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC112220.3-201ENST00000605502 502 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL4A2P08572 MTND5P33-201ENST00000571250 1450 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 CENPCP1-201ENST00000533085 2578 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 SNORA67.1-201ENST00000364749 141 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC119751.3-201ENST00000399720 670 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AL513475.1-201ENST00000406602 315 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RN7SKP266-201ENST00000410232 287 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RNU2-33P-201ENST00000410344 192 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 HMGB1P49-201ENST00000418882 569 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 PGBD4P3-201ENST00000440731 581 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 SNRPGP13-201ENST00000442212 177 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A2P08572 ATP5J2P3-201ENST00000451550 258 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 HMGB1P36-201ENST00000487709 576 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A2P08572 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL4A2P08572 LTV1P1-201ENST00000510683 1237 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RN7SKP49-201ENST00000516675 260 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 RNA5SP471-201ENST00000516971 106 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.37□□□□□ -2.19
COL4A2P08572 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 AC007038.2-201ENST00000608095 740 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC004908.2-201ENST00000609090 574 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AL157392.4-201ENST00000609756 345 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.37□□□□□ -2.19
COL4A2P08572 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.37□□□□□ -2.19
COL4A2P08572 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.37□□□□□ -2.19
COL4A2P08572 U2.21-201ENST00000637295 81 ntBASIC1.37□□□□□ -2.19
COL4A2P08572 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.37□□□□□ -2.19
COL4A2P08572 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A2P08572 AP000776.1-201ENST00000530032 1663 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 RNU6-777P-201ENST00000364265 104 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 RNU6-1328P-201ENST00000410938 106 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC244035.1-201ENST00000430042 390 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 USP9YP25-201ENST00000457708 443 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 EIF4EP3-201ENST00000498782 656 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 ATP5EP1-201ENST00000510257 156 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A2P08572 MTND5P13-201ENST00000513046 1079 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A2P08572 RNU6-143P-201ENST00000516942 93 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A2P08572 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL4A2P08572 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 AC005261.5-201ENST00000596280 355 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 OR10AB1P-201ENST00000609613 938 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AC011939.3-201ENST00000613686 466 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 AC006386.1-201ENST00000619436 415 ntBASIC1.36□□□□□ -2.19
COL4A2P08572 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL4A2P08572 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.36□□□□□ -2.19
COL4A2P08572 MTND5P10-201ENST00000603719 1809 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU4-92P-201ENST00000363783 136 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU6-853P-201ENST00000364306 107 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU4-68P-201ENST00000364314 141 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU6-1072P-201ENST00000384703 107 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RNU6-443P-201ENST00000384780 107 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 MIR620-201ENST00000385232 95 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 MIR1305-201ENST00000408300 86 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.35□□□□□ -2.19
COL4A2P08572 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AC007560.1-201ENST00000426912 237 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 GTF2IP20-201ENST00000431663 360 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RPS6P15-201ENST00000431996 751 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 RPS15AP5-201ENST00000436276 388 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC020550.1-201ENST00000447385 163 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AL139109.1-201ENST00000455491 297 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.35□□□□□ -2.19
COL4A2P08572 RPL37P6-201ENST00000460682 294 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.35□□□□□ -2.19
COL4A2P08572 AC105252.1-201ENST00000503089 286 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC021146.8-201ENST00000507455 733 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 SNORD19.2-201ENST00000516978 73 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 SCARNA11.3-201ENST00000517276 130 ntBASIC1.35□□□□□ -2.19
COL4A2P08572 AC022634.1-201ENST00000520765 532 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms