Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 Y_RNA.378-201ENST00000365652 113 ntBASIC3.23□□□□□ -1.89
MMP3P08254 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
MMP3P08254 SNORA32.2-201ENST00000384049 122 ntBASIC3.23□□□□□ -1.89
MMP3P08254 MIR514A2-201ENST00000385131 88 ntBASIC3.23□□□□□ -1.89
MMP3P08254 MIR514A3-201ENST00000385132 88 ntBASIC3.23□□□□□ -1.89
MMP3P08254 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 AL162578.1-201ENST00000406202 378 ntBASIC3.23□□□□□ -1.89
MMP3P08254 RNU4-46P-201ENST00000410818 138 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
MMP3P08254 RPL21P111-201ENST00000418453 477 ntBASIC3.23□□□□□ -1.89
MMP3P08254 NDUFB4P7-201ENST00000423198 363 ntBASIC3.23□□□□□ -1.89
MMP3P08254 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 UBE2D3P2-201ENST00000424409 445 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP3P08254 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.23□□□□□ -1.89
MMP3P08254 MTND3P10-201ENST00000450967 341 ntBASIC3.23□□□□□ -1.89
MMP3P08254 NIPA2P5-201ENST00000452282 464 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AC006539.3-201ENST00000454258 129 ntBASIC3.23□□□□□ -1.89
MMP3P08254 HMGN2P26-201ENST00000463169 339 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.23□□□□□ -1.89
MMP3P08254 SUMO2P6-201ENST00000505273 288 ntBASIC3.23□□□□□ -1.89
MMP3P08254 SNORA64.4-201ENST00000516632 81 ntBASIC3.23□□□□□ -1.89
MMP3P08254 RNU6-914P-201ENST00000516749 109 ntBASIC3.23□□□□□ -1.89
MMP3P08254 Y_RNA.702-201ENST00000516843 96 ntBASIC3.23□□□□□ -1.89
MMP3P08254 BTF3P12-201ENST00000519620 469 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.23□□□□□ -1.89
MMP3P08254 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP3P08254 SYF2P1-201ENST00000550658 413 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AC078814.3-201ENST00000553036 491 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP3P08254 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP3P08254 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
MMP3P08254 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.23□□□□□ -1.89
MMP3P08254 RNU6-89P-201ENST00000606519 100 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AC022306.2-201ENST00000617563 647 ntBASIC3.23□□□□□ -1.89
MMP3P08254 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
MMP3P08254 AL008636.1-201ENST00000625038 1018 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
MMP3P08254 Z99571.1-201ENST00000636677 394 ntBASIC3.23□□□□□ -1.89
MMP3P08254 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 MTND4P14-201ENST00000435799 1354 ntBASIC3.23□□□□□ -1.89
MMP3P08254 AC002546.1-201ENST00000588041 2504 ntBASIC3.23□□□□□ -1.89
MMP3P08254 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MMP3P08254 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.23□□□□□ -1.89
MMP3P08254 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
MMP3P08254 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP3P08254 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.22□□□□□ -1.89
MMP3P08254 RNU6-1167P-201ENST00000363227 94 ntBASIC3.22□□□□□ -1.89
MMP3P08254 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
MMP3P08254 RNA5SP274-201ENST00000410484 108 ntBASIC3.22□□□□□ -1.89
MMP3P08254 RNU6-387P-201ENST00000411331 105 ntBASIC3.22□□□□□ -1.89
MMP3P08254 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP3P08254 AL160275.3-201ENST00000423876 471 ntBASIC3.22□□□□□ -1.89
MMP3P08254 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.22□□□□□ -1.89
MMP3P08254 USP9YP8-201ENST00000441913 500 ntBASIC3.22□□□□□ -1.89
MMP3P08254 MTND5P20-201ENST00000448677 143 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AL109933.2-201ENST00000452651 260 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AL590639.1-201ENST00000456484 337 ntBASIC3.22□□□□□ -1.89
MMP3P08254 HMGN2P16-201ENST00000456802 261 ntBASIC3.22□□□□□ -1.89
MMP3P08254 PMCHL2-203ENST00000457791 237 ntBASIC3.22□□□□□ -1.89
MMP3P08254 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.22□□□□□ -1.89
MMP3P08254 AC009901.1-201ENST00000506703 541 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AC010486.1-201ENST00000511793 424 ntBASIC3.22□□□□□ -1.89
MMP3P08254 Y_RNA.665-201ENST00000516177 98 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AL163153.1-201ENST00000554223 283 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AL161798.1-201ENST00000604630 131 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AC009994.1-201ENST00000606889 253 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AC034102.8-201ENST00000615146 484 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AL136221.1-201ENST00000621449 509 ntBASIC3.22□□□□□ -1.89
MMP3P08254 AL512643.1-201ENST00000635735 524 ntBASIC3.22□□□□□ -1.89
MMP3P08254 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MMP3P08254 AL136164.4-201ENST00000625013 2135 ntBASIC3.22□□□□□ -1.89
MMP3P08254 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
MMP3P08254 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.21□□□□□ -1.9
MMP3P08254 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.21□□□□□ -1.9
MMP3P08254 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MMP3P08254 Y_RNA.373-201ENST00000365600 103 ntBASIC3.21□□□□□ -1.9
MMP3P08254 RNU6-1127P-201ENST00000384580 107 ntBASIC3.21□□□□□ -1.9
MMP3P08254 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.21□□□□□ -1.9
MMP3P08254 EEF1A1P40-201ENST00000412883 573 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP3P08254 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP3P08254 ERLEC1P1-201ENST00000433806 578 ntBASIC3.21□□□□□ -1.9
MMP3P08254 HMGN2P20-201ENST00000437531 273 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.21□□□□□ -1.9
MMP3P08254 RPS15AP27-201ENST00000449183 343 ntBASIC3.21□□□□□ -1.9
MMP3P08254 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 SCARNA18-201ENST00000459004 134 ntBASIC3.21□□□□□ -1.9
MMP3P08254 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 AC012181.1-201ENST00000479895 423 ntBASIC3.21□□□□□ -1.9
MMP3P08254 HMGN1P12-201ENST00000499125 195 ntBASIC3.21□□□□□ -1.9
MMP3P08254 AC091951.2-201ENST00000500762 203 ntBASIC3.21□□□□□ -1.9
MMP3P08254 RNA5SP468-201ENST00000516782 93 ntBASIC3.21□□□□□ -1.9
MMP3P08254 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.21□□□□□ -1.9
MMP3P08254 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.21□□□□□ -1.9
MMP3P08254 AC107953.1-201ENST00000522216 297 ntBASIC3.21□□□□□ -1.9
MMP3P08254 MTND4P7-201ENST00000523876 130 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms