Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC013470.4-201ENST00000619978 986 ntBASIC0.55□□□□□ -2.32
POLR1AO95602 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC0.55□□□□□ -2.32
POLR1AO95602 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.54□□□□□ -2.32
POLR1AO95602 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
POLR1AO95602 MIR10B-201ENST00000385011 110 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 MTCO1P56-201ENST00000401674 224 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.54□□□□□ -2.32
POLR1AO95602 AC007742.1-201ENST00000425789 329 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC244023.1-201ENST00000426884 112 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC092634.2-201ENST00000428146 1010 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AL591043.1-201ENST00000432461 424 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 ELOCP26-201ENST00000436067 329 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 ARPC3P5-201ENST00000448802 534 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC111193.1-201ENST00000504097 155 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC147055.4-201ENST00000504399 745 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC0.54□□□□□ -2.32
POLR1AO95602 RNU6-1308P-201ENST00000516817 103 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC105036.1-201ENST00000566222 271 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.54□□□□□ -2.32
POLR1AO95602 AC242498.1-201ENST00000604134 111 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 AC243994.1-201ENST00000618627 109 ntBASIC0.54□□□□□ -2.32
POLR1AO95602 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
POLR1AO95602 RNU1-23P-201ENST00000363361 144 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 RNU1-36P-201ENST00000365130 165 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 RNA5SP57-201ENST00000459463 123 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.53□□□□□ -2.32
POLR1AO95602 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.53□□□□□ -2.32
POLR1AO95602 AL121652.1-201ENST00000608851 448 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 OR5H6-203ENST00000642105 978 ntBASIC0.53□□□□□ -2.32
POLR1AO95602 PRRC2CP1-201ENST00000404428 159 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 SSR1P1-201ENST00000407630 814 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AC013410.2-201ENST00000422627 201 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 RNU6-902P-201ENST00000517212 91 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.52□□□□□ -2.33
POLR1AO95602 MIR3921-201ENST00000577308 85 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AC026271.5-201ENST00000577873 130 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 MIR8074-201ENST00000615081 81 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AL078604.3-201ENST00000615580 211 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AL512506.2-201ENST00000624472 458 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
POLR1AO95602 MIR424-201ENST00000362227 98 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.52□□□□□ -2.33
POLR1AO95602 AC112492.4-201ENST00000456549 352 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 DEFB108D-201ENST00000527787 222 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AC004923.2-201ENST00000529649 369 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 OR8K4P-201ENST00000534608 872 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AC007151.1-201ENST00000572774 483 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 AC010900.2-201ENST00000604508 210 ntBASIC0.52□□□□□ -2.33
POLR1AO95602 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.52□□□□□ -2.33
POLR1AO95602 Y_RNA.62-201ENST00000362840 99 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 SNORA2A-201ENST00000383885 135 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 MIR561-201ENST00000385216 97 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 YWHAZP8-201ENST00000436935 731 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 AC093677.1-201ENST00000514414 678 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 RNU6-798P-201ENST00000516912 103 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 SNORA31.22-201ENST00000517204 135 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.51□□□□□ -2.33
POLR1AO95602 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.51□□□□□ -2.33
POLR1AO95602 AC005021.1-201ENST00000608730 355 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 AC110792.4-201ENST00000609843 298 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 AC007792.1-201ENST00000623023 402 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 MTND2P41-201ENST00000637599 773 ntBASIC0.51□□□□□ -2.33
POLR1AO95602 RNU6-374P-201ENST00000364146 108 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 MIR32-201ENST00000384965 70 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 MIR100-201ENST00000385259 80 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 AL449283.1-202ENST00000418249 604 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 PIGFP2-201ENST00000421400 651 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 MTND2P19-201ENST00000449129 1012 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 RPS27P22-201ENST00000478056 241 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
POLR1AO95602 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 AP000254.1-201ENST00000609934 520 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 AC005832.2-201ENST00000538921 1430 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 U3.8-201ENST00000363675 217 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 MIR518A2-201ENST00000384966 87 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 MIR218-1-201ENST00000384999 110 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 RNU6-821P-201ENST00000390995 107 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.5□□□□□ -2.33
POLR1AO95602 MTND4LP10-201ENST00000435146 291 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.5□□□□□ -2.33
POLR1AO95602 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.5□□□□□ -2.33
POLR1AO95602 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.5□□□□□ -2.33
POLR1AO95602 RAB11AP2-201ENST00000545905 639 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 HMGN2P15-201ENST00000585707 270 ntBASIC0.5□□□□□ -2.33
POLR1AO95602 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
POLR1AO95602 AL391516.1-201ENST00000554380 2449 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
POLR1AO95602 OR5T3-201ENST00000303059 1023 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 AL117342.1-201ENST00000404861 406 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 AC009310.1-201ENST00000414414 451 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
POLR1AO95602 AL135790.2-201ENST00000437701 267 ntBASIC0.49□□□□□ -2.33
POLR1AO95602 RSU1P2-202ENST00000437884 485 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms