Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RPL21P38-201ENST00000418090 167 ntBASIC5.12□□□□□ -1.59
PTCD1O75127 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCD1O75127 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCD1O75127 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCD1O75127 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCD1O75127 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCD1O75127 RPS20P22-201ENST00000473700 357 ntBASIC5.12□□□□□ -1.59
PTCD1O75127 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.12□□□□□ -1.59
PTCD1O75127 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCD1O75127 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.12□□□□□ -1.59
PTCD1O75127 AC004852.3-201ENST00000614131 326 ntBASIC5.12□□□□□ -1.59
PTCD1O75127 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
PTCD1O75127 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCD1O75127 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTCD1O75127 RNU6-545P-201ENST00000362681 104 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 U3.15-201ENST00000365398 212 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 Y_RNA.464-201ENST00000384282 110 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 SNORA51.11-201ENST00000384442 131 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 SNORD56-201ENST00000413522 71 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCD1O75127 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.11□□□□□ -1.59
PTCD1O75127 AC087650.1-201ENST00000431445 468 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 AC098831.1-201ENST00000440661 216 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 FABP5P15-201ENST00000453566 214 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 SNORD108-201ENST00000459332 71 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 U8.21-201ENST00000459536 136 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 AC006499.6-201ENST00000511169 607 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 SCARNA14-201ENST00000516903 136 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 ATP5F1P5-201ENST00000526403 760 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 AC100770.1-201ENST00000532310 322 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCD1O75127 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCD1O75127 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.11□□□□□ -1.59
PTCD1O75127 MIR3921-201ENST00000577308 85 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 VN1R91P-201ENST00000594377 169 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 AP002826.1-201ENST00000608835 315 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTCD1O75127 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.11□□□□□ -1.59
PTCD1O75127 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
PTCD1O75127 AP001642.1-201ENST00000624727 2117 ntBASIC5.11□□□□□ -1.59
PTCD1O75127 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
PTCD1O75127 AC007685.1-201ENST00000329806 452 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 SNORD14B-201ENST00000364533 90 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 RNU6-1181P-201ENST00000384191 106 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 MIR10A-201ENST00000385043 110 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCD1O75127 RPL21P17-201ENST00000397467 475 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 SNORA3.3-201ENST00000408712 125 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 RNU6-121P-201ENST00000410525 99 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 Y_RNA.623-201ENST00000411128 95 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 Z85995.1-201ENST00000415547 335 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCD1O75127 RPL27AP8-201ENST00000424277 446 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 EIF1P2-201ENST00000428233 350 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AL356867.1-201ENST00000429623 299 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 MYL8P-204ENST00000431574 518 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 RPL23AP83-201ENST00000434984 473 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 snoU13.24-201ENST00000458998 104 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 TRBVB-201ENST00000477100 408 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCD1O75127 NOL8P1-201ENST00000508336 3529 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 RNU5B-3P-201ENST00000516601 115 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 RNU6-1212P-201ENST00000517023 104 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AC025755.1-201ENST00000521306 278 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.1□□□□□ -1.59
PTCD1O75127 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.1□□□□□ -1.59
PTCD1O75127 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCD1O75127 SRGNP1-201ENST00000603392 451 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AP000787.2-201ENST00000604432 568 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AC019176.2-201ENST00000611579 315 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AP001282.2-201ENST00000616149 309 ntBASIC5.1□□□□□ -1.59
PTCD1O75127 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCD1O75127 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCD1O75127 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PTCD1O75127 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.1□□□□□ -1.59
PTCD1O75127 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTCD1O75127 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCD1O75127 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCD1O75127 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
PTCD1O75127 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCD1O75127 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCD1O75127 RNA5SP97-201ENST00000365006 84 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 Y_RNA.526-201ENST00000384572 110 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 MIR628-201ENST00000385229 95 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCD1O75127 U3.42-201ENST00000408746 214 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AC007098.1-201ENST00000420122 367 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.09□□□□□ -1.59
PTCD1O75127 LINC01399-202ENST00000458450 244 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCD1O75127 AC093852.1-201ENST00000503587 266 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 RNU6-897P-201ENST00000517135 105 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AP003733.2-201ENST00000529409 171 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AC103996.1-201ENST00000555468 102 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms