Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AL136221.1-201ENST00000621449 509 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 RMST_7.1-201ENST00000621935 268 ntBASIC2.87□□□□□ -1.95
CACNA1FO60840 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CACNA1FO60840 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
CACNA1FO60840 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.86□□□□□ -1.95
CACNA1FO60840 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CACNA1FO60840 RNU5E-8P-201ENST00000363502 116 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 SNORA20.2-201ENST00000383922 131 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 Y_RNA.450-201ENST00000384198 113 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 MIR558-201ENST00000384920 94 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 RNU6-278P-201ENST00000390945 109 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AL024474.1-201ENST00000404655 591 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 RNU2-15P-201ENST00000410692 191 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 OR6C66P-201ENST00000414917 930 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.86□□□□□ -1.95
CACNA1FO60840 TOMM20P4-201ENST00000427861 435 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 EZH2P1-201ENST00000431167 291 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AC119618.1-201ENST00000434191 222 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 C1DP4-201ENST00000455429 424 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AL049830.2-201ENST00000480072 201 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.86□□□□□ -1.95
CACNA1FO60840 RNA5SP200-201ENST00000516360 103 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.86□□□□□ -1.95
CACNA1FO60840 CENPUP1-201ENST00000526649 1202 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.86□□□□□ -1.95
CACNA1FO60840 AC025678.1-201ENST00000567861 338 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 MIR4648-201ENST00000580107 72 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 AC025449.1-201ENST00000603896 529 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 YWHAEP7-203ENST00000622054 312 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.86□□□□□ -1.95
CACNA1FO60840 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.86□□□□□ -1.95
CACNA1FO60840 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CACNA1FO60840 CKAP2P1-201ENST00000555477 2049 ntBASIC2.86□□□□□ -1.95
CACNA1FO60840 RNA5SP258-201ENST00000362750 119 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 Y_RNA.142-201ENST00000363491 102 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 Y_RNA.160-201ENST00000363677 92 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 RNU6-629P-201ENST00000384061 103 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 RPS15AP40-201ENST00000419621 391 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.85□□□□□ -1.95
CACNA1FO60840 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.85□□□□□ -1.95
CACNA1FO60840 RNU6-420P-201ENST00000458780 107 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AP000852.1-201ENST00000472460 573 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 MTCO3P9-201ENST00000506989 781 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AC107222.1-201ENST00000510899 637 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.85□□□□□ -1.95
CACNA1FO60840 RN7SKP282-201ENST00000516824 299 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.85□□□□□ -1.95
CACNA1FO60840 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.85□□□□□ -1.95
CACNA1FO60840 MTND5P17-201ENST00000418405 1603 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 ZNF355P-201ENST00000427301 3216 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AC007256.1-201ENST00000392253 2765 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.85□□□□□ -1.95
CACNA1FO60840 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CACNA1FO60840 RNU6-1097P-201ENST00000363586 107 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 RNU6-510P-201ENST00000391239 108 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 RNA5SP181-201ENST00000410246 98 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 RNA5SP118-201ENST00000410385 109 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AL353193.1-201ENST00000421444 268 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.85□□□□□ -1.95
CACNA1FO60840 Y_RNA.682-201ENST00000516457 100 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 CR383656.7-201ENST00000548164 174 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.85□□□□□ -1.95
CACNA1FO60840 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CACNA1FO60840 MTND5P33-201ENST00000571250 1450 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 AC110774.1-201ENST00000623567 2018 ntBASIC2.85□□□□□ -1.95
CACNA1FO60840 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CACNA1FO60840 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CACNA1FO60840 RNU6-335P-201ENST00000364563 113 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 RNU1-138P-201ENST00000384093 164 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 RNU6-1181P-201ENST00000384191 106 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 U3.20-201ENST00000390909 217 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AP000567.1-201ENST00000406413 156 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 MTCO3P12-201ENST00000416718 547 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 SNRPEP10-201ENST00000420249 274 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 HMGN2P20-201ENST00000437531 273 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AC079781.2-201ENST00000446424 169 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AC005297.2-201ENST00000450430 606 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.84□□□□□ -1.95
CACNA1FO60840 SNORD121B-201ENST00000458838 81 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 snoU13.8-201ENST00000458890 104 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 RPL23AP41-201ENST00000484754 458 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.84□□□□□ -1.95
CACNA1FO60840 COX7A2P2-201ENST00000505291 250 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AC022616.3-201ENST00000523940 148 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.84□□□□□ -1.95
CACNA1FO60840 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.84□□□□□ -1.95
CACNA1FO60840 AC125611.2-201ENST00000551907 647 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
CACNA1FO60840 UBE2L4-201ENST00000587688 464 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 HMGN2P28-201ENST00000606102 262 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AL121757.2-201ENST00000611223 313 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AC245517.5-201ENST00000611529 162 ntBASIC2.84□□□□□ -1.95
CACNA1FO60840 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms