Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.56□□□□□ -1.84
PROM1O43490 AL137792.2-201ENST00000443484 235 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.56□□□□□ -1.84
PROM1O43490 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
PROM1O43490 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.56□□□□□ -1.84
PROM1O43490 RPL7P42-201ENST00000481005 679 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC096745.1-201ENST00000509945 370 ntBASIC3.56□□□□□ -1.84
PROM1O43490 RNU6-927P-201ENST00000516199 100 ntBASIC3.56□□□□□ -1.84
PROM1O43490 RNU6-143P-201ENST00000516942 93 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.56□□□□□ -1.84
PROM1O43490 DNAJC8P1-201ENST00000554535 372 ntBASIC3.56□□□□□ -1.84
PROM1O43490 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.56□□□□□ -1.84
PROM1O43490 MIR548AC-201ENST00000585049 88 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC073539.2-201ENST00000597113 165 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC136443.5-201ENST00000603741 370 ntBASIC3.56□□□□□ -1.84
PROM1O43490 NUTF2P8-201ENST00000604593 363 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC019176.2-201ENST00000611579 315 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC034102.8-201ENST00000615146 484 ntBASIC3.56□□□□□ -1.84
PROM1O43490 AC008121.3-201ENST00000618726 433 ntBASIC3.56□□□□□ -1.84
PROM1O43490 Z99571.1-201ENST00000636677 394 ntBASIC3.56□□□□□ -1.84
PROM1O43490 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
PROM1O43490 ZNF807-201ENST00000328088 1707 ntBASIC3.56□□□□□ -1.84
PROM1O43490 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PROM1O43490 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PROM1O43490 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PROM1O43490 MTND4P1-201ENST00000457501 1466 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
PROM1O43490 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PROM1O43490 SNORD3E-201ENST00000362899 217 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RNU6-1040P-201ENST00000383974 107 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RNU6-890P-201ENST00000384121 107 ntBASIC3.55□□□□□ -1.84
PROM1O43490 Y_RNA.480-201ENST00000384364 102 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RNU6-95P-201ENST00000384697 107 ntBASIC3.55□□□□□ -1.84
PROM1O43490 MIR578-201ENST00000384828 96 ntBASIC3.55□□□□□ -1.84
PROM1O43490 MIR514A1-201ENST00000385133 98 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RNA5SP424-201ENST00000390988 115 ntBASIC3.55□□□□□ -1.84
PROM1O43490 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
PROM1O43490 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 AL591419.1-201ENST00000427423 339 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AC236972.1-201ENST00000433225 199 ntBASIC3.55□□□□□ -1.84
PROM1O43490 SNRPEP4-201ENST00000435815 279 ntBASIC3.55□□□□□ -1.84
PROM1O43490 HSPD1P21-201ENST00000436541 245 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 AC097473.1-201ENST00000508142 408 ntBASIC3.55□□□□□ -1.84
PROM1O43490 MTND3P25-201ENST00000509243 135 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RN7SKP209-201ENST00000516888 304 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RNA5SP471-201ENST00000516971 106 ntBASIC3.55□□□□□ -1.84
PROM1O43490 RN7SKP295-201ENST00000517264 153 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AC069113.1-201ENST00000517763 267 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.55□□□□□ -1.84
PROM1O43490 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.55□□□□□ -1.84
PROM1O43490 AL160281.1-201ENST00000605307 311 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AP000654.2-201ENST00000605633 586 ntBASIC3.55□□□□□ -1.84
PROM1O43490 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.55□□□□□ -1.84
PROM1O43490 AC098657.3-201ENST00000620434 263 ntBASIC3.55□□□□□ -1.84
PROM1O43490 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.55□□□□□ -1.84
PROM1O43490 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PROM1O43490 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
PROM1O43490 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.55□□□□□ -1.84
PROM1O43490 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.54□□□□□ -1.84
PROM1O43490 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PROM1O43490 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.54□□□□□ -1.84
PROM1O43490 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PROM1O43490 Y_RNA.594-201ENST00000410373 140 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RNU6-1050P-201ENST00000410388 107 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RNU6-293P-201ENST00000411259 106 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RN7SKP53-201ENST00000411337 315 ntBASIC3.54□□□□□ -1.84
PROM1O43490 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.54□□□□□ -1.84
PROM1O43490 AC113618.1-201ENST00000416747 285 ntBASIC3.54□□□□□ -1.84
PROM1O43490 ATG3P1-201ENST00000419507 911 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.54□□□□□ -1.84
PROM1O43490 AC073063.1-201ENST00000434352 607 ntBASIC3.54□□□□□ -1.84
PROM1O43490 MTND3P2-201ENST00000438452 342 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.54□□□□□ -1.84
PROM1O43490 RNU7-138P-201ENST00000459479 64 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RPL23AP14-201ENST00000468281 468 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RPL31P60-201ENST00000478450 367 ntBASIC3.54□□□□□ -1.84
PROM1O43490 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.54□□□□□ -1.84
PROM1O43490 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.54□□□□□ -1.84
PROM1O43490 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.54□□□□□ -1.84
PROM1O43490 PTP4A1P4-201ENST00000512479 322 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.54□□□□□ -1.84
PROM1O43490 AC026782.1-201ENST00000512952 449 ntBASIC3.54□□□□□ -1.84
PROM1O43490 APOOP4-201ENST00000513530 597 ntBASIC3.54□□□□□ -1.84
PROM1O43490 Y_RNA.661-201ENST00000516003 99 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RNU6-976P-201ENST00000516086 111 ntBASIC3.54□□□□□ -1.84
PROM1O43490 Y_RNA.670-201ENST00000516255 105 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.54□□□□□ -1.84
PROM1O43490 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PROM1O43490 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.54□□□□□ -1.84
PROM1O43490 AC087499.8-201ENST00000578406 226 ntBASIC3.54□□□□□ -1.84
PROM1O43490 MIR5187-201ENST00000583479 76 ntBASIC3.54□□□□□ -1.84
PROM1O43490 AC018462.2-201ENST00000605375 395 ntBASIC3.54□□□□□ -1.84
PROM1O43490 RNU6-85P-201ENST00000605989 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms