Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.88□□□□□ -1.95
SMAD9O15198 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SMAD9O15198 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.88□□□□□ -1.95
SMAD9O15198 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
SMAD9O15198 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC110491.1-201ENST00000562191 2010 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 SNORD3E-201ENST00000362899 217 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 RNU1-105P-201ENST00000363470 161 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 RNY4P14-201ENST00000363656 96 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SMAD9O15198 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.87□□□□□ -1.95
SMAD9O15198 RNU6-45P-201ENST00000384471 107 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 RNU6-393P-201ENST00000384475 107 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 SNORD70.1-201ENST00000391007 85 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 CIR1P3-201ENST00000405137 479 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.87□□□□□ -1.95
SMAD9O15198 GTF2IP20-201ENST00000431663 360 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.87□□□□□ -1.95
SMAD9O15198 RNU7-180P-201ENST00000459240 63 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.87□□□□□ -1.95
SMAD9O15198 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.87□□□□□ -1.95
SMAD9O15198 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.87□□□□□ -1.95
SMAD9O15198 AC008716.1-201ENST00000511084 513 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC011352.1-201ENST00000512300 793 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 LRRC34P2-201ENST00000514850 553 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 MTND4P7-201ENST00000523876 130 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 MTND1P35-201ENST00000526739 508 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.87□□□□□ -1.95
SMAD9O15198 MIR5583-1-201ENST00000580941 59 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.87□□□□□ -1.95
SMAD9O15198 MIR4506-201ENST00000584693 77 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.87□□□□□ -1.95
SMAD9O15198 AC012493.2-201ENST00000595083 291 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC019159.1-201ENST00000605094 187 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.87□□□□□ -1.95
SMAD9O15198 uc_338.34-201ENST00000617467 174 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 AC026585.1-201ENST00000619582 524 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 UCA1.1-201ENST00000620952 75 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SMAD9O15198 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SMAD9O15198 ADAM3A-203ENST00000461344 2157 ntBASIC2.87□□□□□ -1.95
SMAD9O15198 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMAD9O15198 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.86□□□□□ -1.95
SMAD9O15198 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.86□□□□□ -1.95
SMAD9O15198 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMAD9O15198 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMAD9O15198 RNU6-166P-201ENST00000384371 107 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 RNU6-1127P-201ENST00000384580 107 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMAD9O15198 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 RNU6-1068P-201ENST00000410958 103 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 Y_RNA.623-201ENST00000411128 95 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.86□□□□□ -1.95
SMAD9O15198 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.86□□□□□ -1.95
SMAD9O15198 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.86□□□□□ -1.95
SMAD9O15198 AC109925.1-201ENST00000478069 331 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 HMGB1P30-201ENST00000492455 606 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.86□□□□□ -1.95
SMAD9O15198 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.86□□□□□ -1.95
SMAD9O15198 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.86□□□□□ -1.95
SMAD9O15198 RNU4-29P-201ENST00000515943 174 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 SCARNA20.6-201ENST00000517251 106 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC022634.1-201ENST00000520765 532 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.86□□□□□ -1.95
SMAD9O15198 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.86□□□□□ -1.95
SMAD9O15198 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.86□□□□□ -1.95
SMAD9O15198 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.86□□□□□ -1.95
SMAD9O15198 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.86□□□□□ -1.95
SMAD9O15198 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC073539.2-201ENST00000597113 165 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC078899.3-201ENST00000599065 212 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AP003465.2-201ENST00000602571 373 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC012119.1-201ENST00000603184 222 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC092794.1-201ENST00000612734 582 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 U6atac.1-201ENST00000616025 117 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.86□□□□□ -1.95
SMAD9O15198 MIR3199-2-201ENST00000636243 86 ntBASIC2.86□□□□□ -1.95
SMAD9O15198 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SMAD9O15198 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SMAD9O15198 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SMAD9O15198 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMAD9O15198 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SMAD9O15198 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMAD9O15198 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMAD9O15198 Y_RNA.38-201ENST00000362617 102 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 Y_RNA.453-201ENST00000384223 109 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 RNU6-434P-201ENST00000384376 107 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 Y_RNA.573-201ENST00000384763 105 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 RPS4XP7-201ENST00000406274 780 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 BTF3P7-201ENST00000407097 488 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 RNU6-908P-201ENST00000410160 94 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 RNU2-49P-201ENST00000410666 184 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 RNU4-47P-201ENST00000410876 114 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 AC023141.4-201ENST00000412031 328 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.85□□□□□ -1.95
SMAD9O15198 NDUFB4P5-201ENST00000415445 361 ntBASIC2.85□□□□□ -1.95
SMAD9O15198 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.85□□□□□ -1.95
SMAD9O15198 AL669831.1-202ENST00000428504 417 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms