Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.86□□□□□ -2.27
CHD1O14646 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.86□□□□□ -2.27
CHD1O14646 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.86□□□□□ -2.27
CHD1O14646 MTCYBP22-201ENST00000603788 447 ntBASIC0.86□□□□□ -2.27
CHD1O14646 DUXAP10-204ENST00000612052 616 ntBASIC0.86□□□□□ -2.27
CHD1O14646 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.86□□□□□ -2.27
CHD1O14646 AL356585.4-201ENST00000623078 1229 ntBASIC0.86□□□□□ -2.27
CHD1O14646 AC087821.2-201ENST00000637086 450 ntBASIC0.86□□□□□ -2.27
CHD1O14646 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.85□□□□□ -2.27
CHD1O14646 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD1O14646 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD1O14646 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.85□□□□□ -2.27
CHD1O14646 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.85□□□□□ -2.27
CHD1O14646 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD1O14646 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.85□□□□□ -2.27
CHD1O14646 MIR4422-201ENST00000581938 83 ntBASIC0.85□□□□□ -2.27
CHD1O14646 AC016252.1-201ENST00000609721 474 ntBASIC0.85□□□□□ -2.27
CHD1O14646 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
CHD1O14646 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
CHD1O14646 MTND5P30-201ENST00000452896 1731 ntBASIC0.85□□□□□ -2.27
CHD1O14646 MIR218-1-201ENST00000384999 110 ntBASIC0.84□□□□□ -2.27
CHD1O14646 MIR30A-201ENST00000385092 71 ntBASIC0.84□□□□□ -2.27
CHD1O14646 RNU6-272P-201ENST00000411028 104 ntBASIC0.84□□□□□ -2.27
CHD1O14646 AC024082.2-201ENST00000434771 238 ntBASIC0.84□□□□□ -2.27
CHD1O14646 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.84□□□□□ -2.27
CHD1O14646 SNORD116-30-201ENST00000516468 85 ntBASIC0.84□□□□□ -2.27
CHD1O14646 RNA5SP285-201ENST00000516619 119 ntBASIC0.84□□□□□ -2.27
CHD1O14646 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.84□□□□□ -2.27
CHD1O14646 NIFKP6-201ENST00000598115 845 ntBASIC0.84□□□□□ -2.27
CHD1O14646 AL109659.3-201ENST00000624985 950 ntBASIC0.84□□□□□ -2.27
CHD1O14646 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
CHD1O14646 RNU6-1187P-201ENST00000364771 110 ntBASIC0.84□□□□□ -2.28
CHD1O14646 AL449283.1-202ENST00000418249 604 ntBASIC0.84□□□□□ -2.28
CHD1O14646 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.84□□□□□ -2.28
CHD1O14646 AC138853.1-201ENST00000503549 823 ntBASIC0.84□□□□□ -2.28
CHD1O14646 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.84□□□□□ -2.28
CHD1O14646 UBL5P1-201ENST00000507979 193 ntBASIC0.84□□□□□ -2.28
CHD1O14646 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CHD1O14646 AC025857.1-201ENST00000525252 377 ntBASIC0.84□□□□□ -2.28
CHD1O14646 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.84□□□□□ -2.28
CHD1O14646 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.84□□□□□ -2.28
CHD1O14646 HMGN1P30-201ENST00000589286 268 ntBASIC0.84□□□□□ -2.28
CHD1O14646 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.84□□□□□ -2.28
CHD1O14646 AC008498.1-201ENST00000613012 531 ntBASIC0.84□□□□□ -2.28
CHD1O14646 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.84□□□□□ -2.28
CHD1O14646 MIR338-201ENST00000636369 67 ntBASIC0.84□□□□□ -2.28
CHD1O14646 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.83□□□□□ -2.28
CHD1O14646 RNU4-67P-201ENST00000364569 141 ntBASIC0.83□□□□□ -2.28
CHD1O14646 Y_RNA.303-201ENST00000364998 94 ntBASIC0.83□□□□□ -2.28
CHD1O14646 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CHD1O14646 CST2P1-201ENST00000425770 87 ntBASIC0.83□□□□□ -2.28
CHD1O14646 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.83□□□□□ -2.28
CHD1O14646 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.83□□□□□ -2.28
CHD1O14646 RPL26P9-201ENST00000457466 433 ntBASIC0.83□□□□□ -2.28
CHD1O14646 RNU6-27P-201ENST00000516146 107 ntBASIC0.83□□□□□ -2.28
CHD1O14646 AC023158.1-201ENST00000561632 1025 ntBASIC0.83□□□□□ -2.28
CHD1O14646 AL356432.3-201ENST00000568952 465 ntBASIC0.83□□□□□ -2.28
CHD1O14646 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.83□□□□□ -2.28
CHD1O14646 AL161729.4-201ENST00000604650 476 ntBASIC0.83□□□□□ -2.28
CHD1O14646 AC002550.2-201ENST00000621246 394 ntBASIC0.83□□□□□ -2.28
CHD1O14646 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.83□□□□□ -2.28
CHD1O14646 USP9YP19-201ENST00000412165 485 ntBASIC0.82□□□□□ -2.28
CHD1O14646 USP9YP13-201ENST00000417797 480 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.82□□□□□ -2.28
CHD1O14646 TOMM22P2-201ENST00000430735 237 ntBASIC0.82□□□□□ -2.28
CHD1O14646 TAAR7P-201ENST00000436141 242 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AL354941.1-201ENST00000438600 464 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AL592447.1-201ENST00000447592 540 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.82□□□□□ -2.28
CHD1O14646 HMGN1P10-201ENST00000474557 553 ntBASIC0.82□□□□□ -2.28
CHD1O14646 VPS26AP1-201ENST00000483197 979 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AP001025.1-201ENST00000486139 332 ntBASIC0.82□□□□□ -2.28
CHD1O14646 OR5B19P-201ENST00000531766 928 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AC018638.7-201ENST00000605836 1114 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.82□□□□□ -2.28
CHD1O14646 uc_338.14-201ENST00000613162 166 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AC006213.4-201ENST00000616184 634 ntBASIC0.82□□□□□ -2.28
CHD1O14646 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.82□□□□□ -2.28
CHD1O14646 AC005832.2-201ENST00000538921 1430 ntBASIC0.81□□□□□ -2.28
CHD1O14646 RNU6-217P-201ENST00000384164 104 ntBASIC0.81□□□□□ -2.28
CHD1O14646 RNU6-1222P-201ENST00000384615 107 ntBASIC0.81□□□□□ -2.28
CHD1O14646 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD1O14646 AL160275.3-201ENST00000423876 471 ntBASIC0.81□□□□□ -2.28
CHD1O14646 RAC1P7-201ENST00000445367 377 ntBASIC0.81□□□□□ -2.28
CHD1O14646 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD1O14646 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD1O14646 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD1O14646 RNU5A-7P-201ENST00000515979 116 ntBASIC0.81□□□□□ -2.28
CHD1O14646 AP003327.1-201ENST00000529684 127 ntBASIC0.81□□□□□ -2.28
CHD1O14646 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD1O14646 AC090772.4-201ENST00000623599 362 ntBASIC0.81□□□□□ -2.28
CHD1O14646 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CHD1O14646 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CHD1O14646 Y_RNA.67-201ENST00000362870 100 ntBASIC0.81□□□□□ -2.28
CHD1O14646 RNU6-441P-201ENST00000384545 106 ntBASIC0.81□□□□□ -2.28
CHD1O14646 RNA5SP299-201ENST00000391203 116 ntBASIC0.81□□□□□ -2.28
CHD1O14646 AC112492.4-201ENST00000456549 352 ntBASIC0.81□□□□□ -2.28
CHD1O14646 RNA5SP57-201ENST00000459463 123 ntBASIC0.81□□□□□ -2.28
CHD1O14646 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.81□□□□□ -2.28
CHD1O14646 SNORA48.9-201ENST00000516419 162 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms