Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.17□□□□□ -1.9
EIF3FO00303 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
EIF3FO00303 AC004520.1-201ENST00000608362 1413 ntBASIC3.17□□□□□ -1.9
EIF3FO00303 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
EIF3FO00303 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.17□□□□□ -1.9
EIF3FO00303 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.17□□□□□ -1.9
EIF3FO00303 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
EIF3FO00303 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 Y_RNA.516-201ENST00000384541 124 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 MIR147B-201ENST00000390185 80 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 SNORD37.1-201ENST00000390968 65 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RPL21P75-201ENST00000396599 483 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RPL21P28-201ENST00000401418 483 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AL592114.1-201ENST00000403842 483 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AL590002.1-201ENST00000406554 418 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.16□□□□□ -1.9
EIF3FO00303 RNU2-3P-201ENST00000410144 191 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.16□□□□□ -1.9
EIF3FO00303 AL513477.1-202ENST00000417061 214 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.16□□□□□ -1.9
EIF3FO00303 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 PRPS1P1-201ENST00000445305 876 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.16□□□□□ -1.9
EIF3FO00303 RPL21P10-201ENST00000463521 490 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RPL21P39-201ENST00000463605 483 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AC107626.1-201ENST00000471084 183 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RPL21P93-201ENST00000480465 489 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 AC087190.1-201ENST00000484462 480 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
EIF3FO00303 AC093591.1-201ENST00000491435 481 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RPL21P16-201ENST00000495531 483 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 RNU1-143P-201ENST00000516296 146 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.16□□□□□ -1.9
EIF3FO00303 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
EIF3FO00303 BNIP3P6-201ENST00000549284 499 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 MIR2682-201ENST00000580305 110 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AC025165.5-201ENST00000602802 578 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AL162413.1-201ENST00000603198 110 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RPL23AP88-201ENST00000605759 454 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AF250324.2-201ENST00000608299 610 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 U1.23-201ENST00000610293 146 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 AL591516.1-201ENST00000611326 274 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 RNU1-68P-201ENST00000615382 146 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.16□□□□□ -1.9
EIF3FO00303 U1.39-201ENST00000621562 146 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 AL031601.2-202ENST00000622650 282 ntBASIC3.16□□□□□ -1.9
EIF3FO00303 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.16□□□□□ -1.9
EIF3FO00303 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
EIF3FO00303 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
EIF3FO00303 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
EIF3FO00303 MTCO1P12-201ENST00000414273 1543 ntBASIC3.15□□□□□ -1.9
EIF3FO00303 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
EIF3FO00303 Y_RNA.6-201ENST00000362350 114 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 SNORD46.1-201ENST00000364139 104 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 Y_RNA.372-201ENST00000365599 102 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
EIF3FO00303 U3.19-201ENST00000390893 196 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 SNORA16.2-201ENST00000390991 127 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AL513475.1-201ENST00000406602 315 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 RN7SKP220-201ENST00000410611 288 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 BX323014.1-201ENST00000412876 237 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.15□□□□□ -1.91
EIF3FO00303 SEPT14P3-201ENST00000439401 183 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.15□□□□□ -1.91
EIF3FO00303 AC009296.1-201ENST00000443146 155 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.15□□□□□ -1.91
EIF3FO00303 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.15□□□□□ -1.91
EIF3FO00303 AL732372.2-207ENST00000445840 183 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.15□□□□□ -1.91
EIF3FO00303 SEPT14P2-201ENST00000453405 183 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.15□□□□□ -1.91
EIF3FO00303 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.15□□□□□ -1.91
EIF3FO00303 SEPT14P4-201ENST00000513445 186 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 RNU6-1281P-201ENST00000516223 105 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 FO082796.1-201ENST00000523795 183 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 TPRKBP2-201ENST00000565969 475 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 MIR4424-201ENST00000585257 86 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC019159.1-201ENST00000605094 187 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 Z82243.1-201ENST00000609432 473 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC122108.2-201ENST00000611946 526 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC010338.1-201ENST00000621823 717 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
EIF3FO00303 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.15□□□□□ -1.91
EIF3FO00303 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
EIF3FO00303 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
EIF3FO00303 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
EIF3FO00303 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
EIF3FO00303 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
EIF3FO00303 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms