Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
CBX4O00257 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.91□□□□□ -1.78
CBX4O00257 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.91□□□□□ -1.78
CBX4O00257 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.91□□□□□ -1.78
CBX4O00257 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.91□□□□□ -1.78
CBX4O00257 AC087499.8-201ENST00000578406 226 ntBASIC3.91□□□□□ -1.78
CBX4O00257 AC007179.3-201ENST00000604976 235 ntBASIC3.91□□□□□ -1.78
CBX4O00257 AL121917.1-203ENST00000605534 577 ntBASIC3.91□□□□□ -1.78
CBX4O00257 SCARNA4-202ENST00000625402 129 ntBASIC3.91□□□□□ -1.78
CBX4O00257 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CBX4O00257 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
CBX4O00257 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.91□□□□□ -1.78
CBX4O00257 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CBX4O00257 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.91□□□□□ -1.78
CBX4O00257 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.9□□□□□ -1.78
CBX4O00257 Y_RNA.2-201ENST00000362330 96 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU6-884P-201ENST00000363889 107 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU5E-7P-201ENST00000365290 117 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU1-73P-201ENST00000383971 164 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU6-890P-201ENST00000384121 107 ntBASIC3.9□□□□□ -1.79
CBX4O00257 Y_RNA.473-201ENST00000384333 102 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU6-692P-201ENST00000384496 107 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.9□□□□□ -1.79
CBX4O00257 USMG5P1-201ENST00000425964 177 ntBASIC3.9□□□□□ -1.79
CBX4O00257 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.9□□□□□ -1.79
CBX4O00257 RPL9P32-201ENST00000464118 620 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC128713.1-201ENST00000471495 306 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RPL23AP45-201ENST00000476406 468 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.9□□□□□ -1.79
CBX4O00257 AC006445.2-201ENST00000510061 472 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU1-95P-201ENST00000516357 160 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNA5SP164-201ENST00000516533 110 ntBASIC3.9□□□□□ -1.79
CBX4O00257 RNU1-128P-201ENST00000516704 160 ntBASIC3.9□□□□□ -1.79
CBX4O00257 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CBX4O00257 AC026403.1-201ENST00000518938 295 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC107016.1-201ENST00000550463 337 ntBASIC3.9□□□□□ -1.79
CBX4O00257 SNRPGP18-201ENST00000553000 214 ntBASIC3.9□□□□□ -1.79
CBX4O00257 H3F3AP1-201ENST00000559984 334 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC011494.1-201ENST00000596454 237 ntBASIC3.9□□□□□ -1.79
CBX4O00257 SNRPGP17-201ENST00000603780 214 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AL161629.2-201ENST00000615347 275 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC084757.4-201ENST00000616350 526 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC002076.2-201ENST00000617362 122 ntBASIC3.9□□□□□ -1.79
CBX4O00257 MIR6076-201ENST00000617521 113 ntBASIC3.9□□□□□ -1.79
CBX4O00257 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.9□□□□□ -1.79
CBX4O00257 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.89□□□□□ -1.79
CBX4O00257 RNU6-827P-201ENST00000365553 106 ntBASIC3.89□□□□□ -1.79
CBX4O00257 RNU6-1040P-201ENST00000383974 107 ntBASIC3.89□□□□□ -1.79
CBX4O00257 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 RNU6-325P-201ENST00000411132 105 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AL591419.1-201ENST00000427423 339 ntBASIC3.89□□□□□ -1.79
CBX4O00257 Z82205.1-201ENST00000428456 297 ntBASIC3.89□□□□□ -1.79
CBX4O00257 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.89□□□□□ -1.79
CBX4O00257 MTND4P19-201ENST00000446659 478 ntBASIC3.89□□□□□ -1.79
CBX4O00257 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 AC008571.1-201ENST00000467232 300 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC096576.1-201ENST00000489014 359 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC113155.1-201ENST00000511141 769 ntBASIC3.89□□□□□ -1.79
CBX4O00257 ACA59.1-201ENST00000515966 143 ntBASIC3.89□□□□□ -1.79
CBX4O00257 RNU6-976P-201ENST00000516086 111 ntBASIC3.89□□□□□ -1.79
CBX4O00257 Y_RNA.687-201ENST00000516558 91 ntBASIC3.89□□□□□ -1.79
CBX4O00257 RNU6-1183P-201ENST00000517054 60 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.89□□□□□ -1.79
CBX4O00257 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
CBX4O00257 TRAV32-201ENST00000553993 340 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AMZ2P1-203ENST00000565833 850 ntBASIC3.89□□□□□ -1.79
CBX4O00257 MIR3609-201ENST00000582661 80 ntBASIC3.89□□□□□ -1.79
CBX4O00257 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.89□□□□□ -1.79
CBX4O00257 AC005899.2-201ENST00000584353 90 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC020914.4-201ENST00000597690 277 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC025946.2-201ENST00000603398 234 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC011890.2-201ENST00000613393 294 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AL391261.4-201ENST00000616012 481 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC103858.2-201ENST00000621471 543 ntBASIC3.89□□□□□ -1.79
CBX4O00257 AC073308.1-201ENST00000623696 305 ntBASIC3.89□□□□□ -1.79
CBX4O00257 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CBX4O00257 AC092608.2-201ENST00000624427 218 ntBASIC3.89□□□□□ -1.79
CBX4O00257 U2.21-201ENST00000637295 81 ntBASIC3.89□□□□□ -1.79
CBX4O00257 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.89□□□□□ -1.79
CBX4O00257 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.89□□□□□ -1.79
CBX4O00257 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CBX4O00257 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CBX4O00257 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CBX4O00257 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.88□□□□□ -1.79
CBX4O00257 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CBX4O00257 Y_RNA.132-201ENST00000363421 102 ntBASIC3.88□□□□□ -1.79
CBX4O00257 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.88□□□□□ -1.79
CBX4O00257 Y_RNA.404-201ENST00000383978 102 ntBASIC3.88□□□□□ -1.79
CBX4O00257 Y_RNA.422-201ENST00000384054 114 ntBASIC3.88□□□□□ -1.79
CBX4O00257 RNU6-72P-201ENST00000384285 79 ntBASIC3.88□□□□□ -1.79
CBX4O00257 SNORA75.6-201ENST00000391318 127 ntBASIC3.88□□□□□ -1.79
CBX4O00257 SYF2P2-201ENST00000417620 583 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AL159987.2-201ENST00000432754 307 ntBASIC3.88□□□□□ -1.79
CBX4O00257 RPL23AP50-201ENST00000434149 455 ntBASIC3.88□□□□□ -1.79
CBX4O00257 SNRPEP4-201ENST00000435815 279 ntBASIC3.88□□□□□ -1.79
CBX4O00257 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms