Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC025449.1-201ENST00000603896 529 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 NDUFA8P1-201ENST00000605525 367 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC098679.4-201ENST00000624241 654 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 AC243829.7-201ENST00000633081 225 ntBASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM49D1C9J1S8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AC005832.2-201ENST00000538921 1430 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-512P-201ENST00000364438 103 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-259P-201ENST00000383999 107 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-74P-201ENST00000384235 107 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 Y_RNA.554-201ENST00000384672 102 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 MRPL42P2-201ENST00000403169 426 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 TAAR7P-201ENST00000436141 242 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AC108078.1-201ENST00000508073 725 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 RN7SKP298-201ENST00000515950 94 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 MTCO2P4-201ENST00000517968 247 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AC109329.2-201ENST00000519658 482 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AC245505.1-201ENST00000556398 224 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 SUB1P2-201ENST00000556401 297 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 MIR5583-1-201ENST00000580941 59 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AL136363.2-201ENST00000604173 851 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AP002360.4-201ENST00000606980 481 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AC027309.3-201ENST00000623419 351 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 OR5AK4P-201ENST00000635912 903 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRIM49D1C9J1S8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 OR4G2P-201ENST00000328113 903 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 DEFB108F-201ENST00000344638 222 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RNU4-82P-201ENST00000362443 140 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-1090P-201ENST00000364065 94 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RNA5SP37-201ENST00000365420 130 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-946P-201ENST00000383878 107 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 SNORA75B-201ENST00000384053 137 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 SNORA24.1-201ENST00000384401 135 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 SNORA51.11-201ENST00000384442 131 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 Y_RNA.582-201ENST00000391023 95 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 MIR548F1-201ENST00000408667 84 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-193P-201ENST00000410977 107 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AL031779.1-201ENST00000415663 330 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC133104.1-201ENST00000429100 218 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RPL35AP22-201ENST00000436855 335 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 DDX3P2-201ENST00000446138 111 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RPL23AP7-203ENST00000449021 469 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 MTND2P24-201ENST00000453434 806 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 MTND1P9-201ENST00000453775 944 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RPL12P25-201ENST00000455592 494 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RPS29P15-201ENST00000458329 171 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC007182.2-201ENST00000489251 402 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 RPS29P20-201ENST00000489592 171 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC139453.3-201ENST00000493276 369 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 MTCO3P9-201ENST00000506989 781 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 Y_RNA.704-201ENST00000516851 102 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AP001646.1-201ENST00000527936 915 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 HMGB1P14-201ENST00000557424 591 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC068135.2-201ENST00000569293 1028 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC090616.3-201ENST00000582184 217 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 DEFB131E-202ENST00000602581 683 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AP001596.2-201ENST00000608410 312 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC084782.3-201ENST00000612282 578 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 HULC.1-201ENST00000612720 240 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AC108479.2-201ENST00000617314 601 ntBASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.17□□□□□ -2.06
TRIM49D1C9J1S8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms