Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RPL23AP42-201ENST00000471152 471 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 MTND1P3-201ENST00000484956 952 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 MTND4P2-201ENST00000507767 1203 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 RNU6-1315P-201ENST00000517187 99 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC026271.5-201ENST00000577873 130 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 MIR5089-201ENST00000580047 84 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 VN1R82P-201ENST00000601481 356 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 KC877982.1-201ENST00000602313 470 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AL078605.1-201ENST00000603529 500 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC091965.4-201ENST00000607691 587 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC005296.1-201ENST00000616145 209 ntBASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
RBFOX3A6NFN3 AC103710.2-202ENST00000641454 2853 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 RNU1-23P-201ENST00000363361 144 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 RNU6-288P-201ENST00000363690 104 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 FTH1P15-201ENST00000406984 280 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 HMGB3P12-201ENST00000438745 556 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 MTND3P1-201ENST00000441336 220 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AC013828.2-201ENST00000532487 235 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AC091544.4-201ENST00000555268 342 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AL356432.3-201ENST00000568952 465 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AC243960.4-201ENST00000600532 288 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 SNRPGP17-201ENST00000603780 214 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 AL773524.1-201ENST00000614065 229 ntBASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
RBFOX3A6NFN3 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 SNORA16.1-201ENST00000364597 132 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 SMIM11P1-201ENST00000369586 178 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 SNORA70B-201ENST00000384210 135 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 RNU1-57P-201ENST00000384491 166 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 FCF1P10-201ENST00000407590 479 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 SNORA11.4-201ENST00000408823 129 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 ELOCP17-201ENST00000414751 326 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 ELOCP9-201ENST00000418624 239 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 Z98742.3-201ENST00000418637 326 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 DPH3P2-201ENST00000422618 250 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AL356320.1-201ENST00000429616 163 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 MTND2P29-201ENST00000438595 412 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AL031313.1-201ENST00000448435 256 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AL137159.1-201ENST00000452808 512 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC109927.2-201ENST00000506416 303 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 RNU6-914P-201ENST00000516749 109 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 RNU6-677P-201ENST00000516914 101 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 SNORA31.23-201ENST00000517219 133 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 OR5AL2P-201ENST00000532185 920 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 SNRPGP18-201ENST00000553000 214 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AL157871.3-201ENST00000557231 293 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 MTCYBP23-201ENST00000558717 1102 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC018638.7-201ENST00000605836 1114 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC010378.1-201ENST00000619270 362 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AL049777.1-201ENST00000622740 518 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 FRG1KP-201ENST00000623592 341 ntBASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
RBFOX3A6NFN3 RNU5E-1-201ENST00000362477 120 ntBASIC1.49□□□□□ -2.17
RBFOX3A6NFN3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.49□□□□□ -2.17
RBFOX3A6NFN3 SNORD114-19-201ENST00000363072 75 ntBASIC1.49□□□□□ -2.17
RBFOX3A6NFN3 RNU6-511P-201ENST00000363496 107 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms