Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AC241585.2-209ENST00000638217 143 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 AP000776.1-201ENST00000530032 1663 ntBASIC1.07□□□□□ -2.24
TRAV1-1A0A0B4J248 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR1323-201ENST00000408090 73 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC078974.1-201ENST00000411597 223 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC009310.1-201ENST00000414414 451 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 MRPS36P1-201ENST00000421291 307 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AL354695.1-201ENST00000427935 228 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 SNRPGP13-201ENST00000442212 177 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC112771.1-201ENST00000463581 102 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC093809.1-201ENST00000509155 340 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 RN7SKP219-201ENST00000516825 296 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 ACA59.2-201ENST00000517061 156 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 DEFB131D-201ENST00000526803 184 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC093012.1-202ENST00000549403 582 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC087897.1-201ENST00000550134 156 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 ELOCP5-201ENST00000604924 333 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC034229.4-201ENST00000607861 441 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AC092192.1-201ENST00000633154 1018 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 AL161722.3-201ENST00000605789 2983 ntBASIC1.06□□□□□ -2.24
TRAV1-1A0A0B4J248 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU5B-4P-201ENST00000363508 111 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-512P-201ENST00000364438 103 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 SNORA67.5-201ENST00000391036 107 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR1302-8-201ENST00000408342 128 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-390P-201ENST00000516259 103 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 SNORA31.24-201ENST00000517232 57 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 CYCSP27-201ENST00000527643 293 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL133153.1-201ENST00000557756 303 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 SNORD53B-201ENST00000577887 78 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AC021646.1-201ENST00000605469 484 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AC008121.3-201ENST00000618726 433 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AC231657.1-201ENST00000624313 397 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AL356094.1-201ENST00000624663 1212 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AC097655.1-201ENST00000635075 318 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 AC006927.2-201ENST00000639256 389 ntBASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
TRAV1-1A0A0B4J248 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-744P-201ENST00000365557 107 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-1316P-201ENST00000384242 108 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 MIR518D-201ENST00000385014 87 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 RNA5SP465-201ENST00000391195 109 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AL359634.1-202ENST00000404721 284 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 RPL21P24-201ENST00000413752 448 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 HMGB1P27-201ENST00000431429 603 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 FCF1P6-201ENST00000456841 595 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AC006512.1-201ENST00000468816 291 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 OR8K2P-201ENST00000524645 927 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AL356432.3-201ENST00000568952 465 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 DPPA3P3-201ENST00000603842 430 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 AL163152.1-201ENST00000642001 374 ntBASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
TRAV1-1A0A0B4J248 Y_RNA.140-201ENST00000363474 103 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 snoZ40.1-201ENST00000364540 72 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 RNU6-1280P-201ENST00000365211 107 ntBASIC1.03□□□□□ -2.24
TRAV1-1A0A0B4J248 RNA5SP190-201ENST00000365222 118 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms