Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 SNORA31-201ENST00000362607 130 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.263-201ENST00000364659 114 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 SNORD6-201ENST00000365444 73 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.356-201ENST00000365475 113 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RPS12P24-201ENST00000412619 387 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC010095.1-201ENST00000443543 144 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 SCARNA18-201ENST00000459004 134 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RPL9P32-201ENST00000464118 620 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RPL21P104-201ENST00000464143 478 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 TRBV12-1-201ENST00000479785 344 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RPS15AP34-201ENST00000487776 387 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 SNORA31.3-201ENST00000516029 96 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AP001804.3-201ENST00000525146 880 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 MIR4424-201ENST00000585257 86 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC005261.5-201ENST00000596280 355 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC103710.3-201ENST00000608157 948 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC006023.2-201ENST00000609916 167 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AC018692.3-201ENST00000623929 123 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 MIR7153-201ENST00000637758 57 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 AL359693.1-201ENST00000614959 2407 ntBASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RAI2Q9Y5P3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RNU6-14P-201ENST00000384630 106 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RNU6-328P-201ENST00000390887 106 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AL139039.1-201ENST00000401900 692 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RN7SKP32-201ENST00000410167 303 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RPS15AP6-201ENST00000420703 385 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AL591704.1-201ENST00000432574 275 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 MTND4LP16-201ENST00000440828 295 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AP001086.1-201ENST00000494882 321 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP356-201ENST00000515972 94 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.665-201ENST00000516177 98 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RNU1-143P-201ENST00000516296 146 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 SNORA64.4-201ENST00000516632 81 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP291-201ENST00000517222 105 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RPL7P20-201ENST00000520308 745 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC107953.1-201ENST00000522216 297 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AP000763.2-201ENST00000540641 163 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 PSMA3P-201ENST00000555485 635 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 MIR5583-1-201ENST00000580941 59 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC243960.4-201ENST00000600532 288 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC007687.1-201ENST00000602704 304 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC092807.2-201ENST00000609367 243 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 Z82243.1-201ENST00000609432 473 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 U1.23-201ENST00000610293 146 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 U2.17-201ENST00000611454 95 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 uc_338.5-201ENST00000611839 155 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AC034102.8-201ENST00000615146 484 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 RNU1-68P-201ENST00000615382 146 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 U1.39-201ENST00000621562 146 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 MTND4P35-201ENST00000604257 1375 ntBASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.19□□□□□ -1.9
RAI2Q9Y5P3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AF117829.1-206ENST00000621883 3802 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 AC010733.2-201ENST00000589496 5702 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 UBE2L2-201ENST00000254302 429 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 RNU4-82P-201ENST00000362443 140 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.18□□□□□ -1.9
RAI2Q9Y5P3 RNA5SP129-201ENST00000410276 118 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms