Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
PCDHGA1Q9Y5H4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AL390237.1-201ENST00000404226 1415 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-348P-201ENST00000384386 107 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SNORA67.4-201ENST00000384688 142 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AL096701.2-201ENST00000416920 238 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 BX295541.1-201ENST00000417774 250 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 C1DP2-201ENST00000418167 426 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AL109913.1-201ENST00000421173 514 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 RPL23AP30-201ENST00000432419 501 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AL591212.2-201ENST00000433923 257 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AL161651.1-201ENST00000440882 223 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 MTCO1P19-201ENST00000443487 500 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SCARNA17.1-201ENST00000516211 143 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SCARNA17.2-201ENST00000516334 143 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SCARNA24.1-201ENST00000516465 137 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 RNA5SP24-201ENST00000516478 95 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 Y_RNA.689-201ENST00000516589 107 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AP003072.2-201ENST00000527756 676 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 OR5BN1P-201ENST00000532955 829 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 MIR4528-201ENST00000577763 90 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 MIR4782-201ENST00000577987 79 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC245014.2-201ENST00000603689 287 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC246785.4-201ENST00000605374 287 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 RN7SKP299-201ENST00000606679 301 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC069234.5-201ENST00000611056 416 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 AC130324.3-201ENST00000614165 542 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SCARNA17.4-201ENST00000614296 143 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 Z99571.1-201ENST00000636677 394 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 U6.99-201ENST00000637524 83 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 MTND4P27-201ENST00000450813 1354 ntBASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
PCDHGA1Q9Y5H4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 SNORA4.3-201ENST00000365564 137 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-19P-201ENST00000384718 107 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AL592148.1-201ENST00000413568 445 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC092809.3-201ENST00000415453 231 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 PIGFP2-201ENST00000421400 651 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 RPL31P35-201ENST00000431058 377 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 KATNBL1P3-201ENST00000443475 909 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC233279.1-201ENST00000455300 423 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC139453.3-201ENST00000493276 369 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC117522.1-201ENST00000509821 380 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-914P-201ENST00000516749 109 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC006199.1-201ENST00000548728 219 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC009163.5-201ENST00000575421 637 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC012119.1-201ENST00000603184 222 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AL589743.7-201ENST00000612637 233 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC010678.1-201ENST00000614118 713 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC009509.4-201ENST00000619202 509 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC064859.1-201ENST00000624741 174 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AC090582.1-201ENST00000636321 199 ntBASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHGA1Q9Y5H4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 AP006437.1-201ENST00000641440 3685 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU1-112P-201ENST00000364401 164 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 XGY1-201ENST00000381172 446 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 RNU6-190P-201ENST00000384154 102 ntBASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PCDHGA1Q9Y5H4 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms