Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 SNORD3E-201ENST00000362899 217 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-270P-201ENST00000364131 105 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RNA5SP387-201ENST00000364226 106 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-593P-201ENST00000364716 112 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AL591419.1-201ENST00000427423 339 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC091286.1-201ENST00000431233 461 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC236972.2-201ENST00000434979 310 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 BTF3P15-201ENST00000455606 336 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AL133162.1-201ENST00000463228 453 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RN7SL330P-201ENST00000469709 307 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AP002884.2-201ENST00000471647 395 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC084198.1-201ENST00000477747 402 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC096745.1-201ENST00000509945 370 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 RNU6-273P-201ENST00000516937 96 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC025423.5-201ENST00000550230 219 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC084757.4-201ENST00000616350 526 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AL034408.1-202ENST00000636088 415 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 ZNF519P1-201ENST00000449011 1626 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC233263.6-201ENST00000631132 1963 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AL021368.2-201ENST00000606125 5352 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 AC007256.1-201ENST00000392253 2765 ntBASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PCDHGA3Q9Y5H0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.431-201ENST00000384086 102 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 PTMAP5-201ENST00000393073 333 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AL391417.1-201ENST00000404100 426 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 U3.37-201ENST00000408528 213 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 RNA5SP38-201ENST00000410750 119 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 RPL37P10-201ENST00000412884 288 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 SKA2P1-201ENST00000425592 390 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 RPL23AP83-201ENST00000434984 473 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 SETP5-201ENST00000437270 562 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC083863.1-201ENST00000438811 231 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 MTND1P17-201ENST00000448961 204 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC233279.1-201ENST00000455300 423 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 snoU13.28-201ENST00000459235 104 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 RNA5SP164-201ENST00000516533 110 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 GNRHR2P1-201ENST00000555315 631 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 H3F3AP1-201ENST00000559984 334 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 AL133216.2-202ENST00000634512 349 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 IPO8P1-201ENST00000455509 3109 ntBASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.71□□□□□ -1.82
PCDHGA3Q9Y5H0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 Y_RNA.339-201ENST00000365325 102 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 RN7SKP158-201ENST00000410453 326 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 RNA5SP31-201ENST00000411144 127 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 SYF2P2-201ENST00000417620 583 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 PGBD4P6-201ENST00000421501 610 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC098831.1-201ENST00000440661 216 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 UBE2V1P7-201ENST00000446395 340 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 RPL7P49-201ENST00000471402 708 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 RPS27P27-201ENST00000498779 255 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 SCARNA14-201ENST00000516903 136 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 COPS8P3-201ENST00000526024 482 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AL391261.3-201ENST00000557194 520 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 CYCSP39-201ENST00000565821 309 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 MIR5187-201ENST00000583479 76 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC008121.1-201ENST00000603244 268 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 AC010378.1-201ENST00000619270 362 ntBASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDHGA3Q9Y5H0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms