Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 Y_RNA.673-201ENST00000516306 88 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 RN7SKP272-201ENST00000516988 232 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC091144.1-201ENST00000519573 138 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC010928.2-201ENST00000588017 287 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 SDR42E1P4-201ENST00000620894 481 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC243829.7-201ENST00000633081 225 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 U6.92-201ENST00000636464 89 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 AC233981.2-201ENST00000611524 1614 ntBASIC3.95□□□□□ -1.78
SF3B6Q9Y3B4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 RNA5SP87-201ENST00000384155 118 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 Y_RNA.562-201ENST00000384695 113 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 RN7SKP267-201ENST00000410381 285 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 RPL37P18-201ENST00000411602 243 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AL358453.1-201ENST00000422522 250 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AL591043.1-201ENST00000432461 424 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AC243964.1-201ENST00000441814 261 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 MTND4LP30-201ENST00000454092 297 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 RPL23AP14-201ENST00000468281 468 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AC067942.3-201ENST00000512025 362 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AP004242.1-201ENST00000533701 349 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 MIR4270-201ENST00000581799 70 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AC012433.1-201ENST00000588916 398 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 AL355877.2-201ENST00000603670 358 ntBASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3B6Q9Y3B4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AC125257.1-201ENST00000560400 2930 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RNA5SP388-201ENST00000362584 119 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 SNORA20.1-201ENST00000364790 130 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RNU6-968P-201ENST00000384076 107 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 SNORD116-20-201ENST00000384529 92 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RNU6-1093P-201ENST00000391194 107 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RNA5SP44-201ENST00000410446 133 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RPL26P27-201ENST00000414397 437 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 BX510359.2-201ENST00000417920 305 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RPL21P40-201ENST00000428586 483 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AC091286.1-201ENST00000431233 461 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AL031659.1-201ENST00000447075 539 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RPL37P4-201ENST00000448908 268 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 HMGB3P8-201ENST00000449709 577 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AC006026.2-201ENST00000457376 180 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 snoU13.30-201ENST00000458951 104 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 S100A11P1-201ENST00000477525 312 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 HMGB1P35-201ENST00000503360 598 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 ANXA2P1-201ENST00000505539 926 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AC091874.1-201ENST00000511402 339 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AP001880.2-201ENST00000538233 448 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 AC012603.1-201ENST00000606424 528 ntBASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.93□□□□□ -1.78
SF3B6Q9Y3B4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 RNU6-222P-201ENST00000362438 107 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 RNU6-212P-201ENST00000362642 104 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 RNU4-9P-201ENST00000364951 139 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 MIR215-201ENST00000384858 110 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 MIR1911-201ENST00000410783 80 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 AL132765.1-201ENST00000434165 553 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 AC016831.4-201ENST00000438302 307 ntBASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3B6Q9Y3B4 RPL30P1-201ENST00000488676 339 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms