Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC011979.2-201ENST00000527568 352 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AL137161.1-201ENST00000532231 390 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC024619.4-201ENST00000580924 316 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 MIR4524B-201ENST00000581569 115 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 MAGOH2P-202ENST00000584384 429 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC092747.3-201ENST00000603769 301 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AL138825.1-201ENST00000618587 192 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 SNORA62.2-201ENST00000364672 152 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 RNU6-641P-201ENST00000384006 107 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 MIR450B-201ENST00000401182 78 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AL357075.1-201ENST00000404107 726 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 MTND4LP30-201ENST00000454092 297 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 RN7SL863P-201ENST00000462370 296 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 RPS23P3-201ENST00000470993 430 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 HIGD1AP1-201ENST00000550979 275 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC005476.1-201ENST00000554427 397 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 SUB1P3-201ENST00000564581 315 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 MIR4703-201ENST00000577728 79 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 MIR4775-201ENST00000581168 75 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC060771.1-201ENST00000582031 164 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC068790.3-201ENST00000602988 553 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC004792.1-201ENST00000614523 137 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC107081.3-201ENST00000612715 2034 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 AC022031.1-201ENST00000585985 2593 ntBASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH3Q9UM47 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 RNU6-545P-201ENST00000362681 104 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 RNU6-7-201ENST00000364784 107 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 RNU6-806P-201ENST00000365147 105 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 RNU6-8-201ENST00000365467 107 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.461-201ENST00000384263 103 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 RNU6-125P-201ENST00000384505 107 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 RNU6-310P-201ENST00000384655 107 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 SNORA48.8-201ENST00000391324 134 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC010881.1-201ENST00000433830 235 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC013470.1-201ENST00000453438 462 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC112492.4-201ENST00000456549 352 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 PRELID3BP1-201ENST00000457142 540 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AL049714.1-201ENST00000466686 347 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC006445.1-201ENST00000491925 405 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC008526.1-201ENST00000509149 338 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 Y_RNA.708-201ENST00000516950 96 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 SNORD39.2-201ENST00000579995 76 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 SNORD39.3-201ENST00000584451 71 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AL451007.1-201ENST00000595491 289 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AP001486.3-201ENST00000615334 372 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 AL049555.1-201ENST00000562834 1933 ntBASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NOTCH3Q9UM47 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.59□□□□□ -2
NOTCH3Q9UM47 Y_RNA.180-201ENST00000363867 113 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 RNY4P16-201ENST00000364768 94 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 Y_RNA.506-201ENST00000384494 102 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 RNU6-1081P-201ENST00000384537 107 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 RNU6-278P-201ENST00000390945 109 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.59□□□□□ -2
NOTCH3Q9UM47 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 MTCO3P8-201ENST00000453691 755 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 TXNP6-201ENST00000510190 310 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 RN7SKP132-201ENST00000516001 208 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 RNU4-71P-201ENST00000516258 113 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 Y_RNA.676-201ENST00000516393 96 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 Y_RNA.703-201ENST00000516846 111 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 AP000763.2-201ENST00000540641 163 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 RPL12P50-201ENST00000603116 116 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 AL138726.1-201ENST00000614873 333 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 uc_338.12-201ENST00000616344 181 ntBASIC2.59□□□□□ -2
NOTCH3Q9UM47 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.59□□□□□ -2
NOTCH3Q9UM47 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms