| VANGL2 | Q9ULK5 | AC097463.2-201 | ENST00000421074 | 142 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AL121890.1-201 | ENST00000435457 | 205 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AC004383.1-201 | ENST00000438135 | 289 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | CR769776.1-201 | ENST00000441254 | 787 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AC068587.2-201 | ENST00000478386 | 781 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AP006587.4-201 | ENST00000526053 | 529 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AP003498.1-201 | ENST00000532530 | 347 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AP000462.2-203 | ENST00000540545 | 715 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | ANP32BP3-201 | ENST00000559213 | 706 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AC022150.3-201 | ENST00000599143 | 880 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AL096840.1-201 | ENST00000603287 | 93 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AL138963.2-201 | ENST00000605137 | 226 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | BCRP9-201 | ENST00000605312 | 388 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AC091965.4-201 | ENST00000607691 | 587 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AC103710.2-201 | ENST00000609912 | 942 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | MIR6134-201 | ENST00000617606 | 109 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | MIR5739-201 | ENST00000619803 | 80 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | AL607023.1-201 | ENST00000620045 | 248 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | OR8K3-204 | ENST00000641689 | 2380 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | Z75746.1-201 | ENST00000440243 | 2080 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | CDC27P3-201 | ENST00000635418 | 1910 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| VANGL2 | Q9ULK5 | ZNF876P-202 | ENST00000398732 | 1485 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | MTND4P16-201 | ENST00000466108 | 1367 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNY4P24-201 | ENST00000362735 | 96 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU6-931P-201 | ENST00000363850 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU6-188P-201 | ENST00000364207 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | TRAJ49-201 | ENST00000390488 | 56 nt | APPRIS P1 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | CIR1P3-201 | ENST00000405137 | 479 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | LINC01427-201 | ENST00000420928 | 504 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL157786.1-206 | ENST00000424422 | 551 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL391336.1-201 | ENST00000424678 | 484 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | MTND1P32-201 | ENST00000433043 | 938 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RPL7P34-201 | ENST00000433316 | 712 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL157937.1-201 | ENST00000435092 | 443 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL356124.2-201 | ENST00000442449 | 391 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC092001.1-201 | ENST00000453012 | 261 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | Z98749.1-201 | ENST00000454123 | 541 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | CYP2C59P-201 | ENST00000457790 | 269 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | snoU13.26-201 | ENST00000459452 | 105 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RPL36AP48-201 | ENST00000485521 | 314 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | MTAPP1-201 | ENST00000489154 | 819 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RPL39P36-201 | ENST00000490784 | 156 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC139453.3-201 | ENST00000493276 | 369 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | C4orf33-204 | ENST00000502887 | 1126 nt | TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU2-44P-201 | ENST00000516795 | 194 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | SCARNA1-201 | ENST00000517138 | 166 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC068992.1-202 | ENST00000519280 | 270 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | CBX3P7-201 | ENST00000532876 | 502 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC092747.1-202 | ENST00000540595 | 380 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | SOX2-OT-224 | ENST00000595313 | 716 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | BNIP3P9-201 | ENST00000603714 | 553 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.6-201 | ENST00000603753 | 252 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.11-201 | ENST00000604059 | 253 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC008162.1-201 | ENST00000604718 | 254 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.1-201 | ENST00000604752 | 252 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.5-201 | ENST00000605253 | 252 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.12-201 | ENST00000605291 | 253 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.8-201 | ENST00000605353 | 252 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL670379.7-201 | ENST00000605823 | 252 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL136370.1-201 | ENST00000608166 | 691 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC016597.2-201 | ENST00000613256 | 341 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL078595.3-201 | ENST00000623815 | 1166 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | OR4G3P-201 | ENST00000633500 | 913 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | CCDC82-202 | ENST00000423339 | 1878 nt | APPRIS P2 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.02 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | KTN1-203 | ENST00000395309 | 4021 nt | APPRIS ALT2 TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC092881.1-201 | ENST00000638218 | 2733 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | MIR513B-201 | ENST00000385136 | 84 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU6-584P-201 | ENST00000410350 | 95 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL513008.1-201 | ENST00000412701 | 161 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL353621.1-201 | ENST00000418219 | 243 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | LINC00397-201 | ENST00000422074 | 344 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL391069.1-201 | ENST00000422153 | 358 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL390774.2-201 | ENST00000423942 | 788 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | SMG7-AS1-202 | ENST00000432837 | 466 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | HMGN2P3-201 | ENST00000433603 | 273 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | HMGN2P5-201 | ENST00000436882 | 273 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | LARP1BP3-201 | ENST00000437229 | 869 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | ZNF736P11Y-201 | ENST00000442535 | 1213 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | LINC00363-201 | ENST00000443228 | 210 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RPL7P12-201 | ENST00000446719 | 750 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC013269.3-201 | ENST00000450486 | 444 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC055764.1-201 | ENST00000454526 | 473 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU6-953P-201 | ENST00000459154 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | CKS1BP2-201 | ENST00000497342 | 240 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC106821.1-201 | ENST00000502861 | 572 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC110751.1-201 | ENST00000511916 | 462 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | MTRNR2L5-201 | ENST00000512524 | 739 nt | APPRIS P1 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC091887.1-201 | ENST00000514002 | 439 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU6-581P-201 | ENST00000516214 | 105 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU6-311P-201 | ENST00000516224 | 102 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | RNU5A-4P-201 | ENST00000516588 | 111 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC016987.2-201 | ENST00000560696 | 351 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC012378.1-201 | ENST00000561155 | 364 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | BNIP3P39-201 | ENST00000601077 | 554 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AL031281.1-201 | ENST00000604049 | 488 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| VANGL2 | Q9ULK5 | AC009318.2-201 | ENST00000610917 | 651 nt | BASIC | 2.01 | □□□□□ -2.09 | | |