Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC009237.8-201ENST00000445492 379 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AL031183.1-201ENST00000457667 207 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 RNA5SP310-201ENST00000459084 116 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC083906.5-201ENST00000503722 328 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC104806.1-201ENST00000508720 308 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 RNU6-927P-201ENST00000516199 100 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 RNU6-1281P-201ENST00000516223 105 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC092325.1-201ENST00000566449 554 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC098826.3-201ENST00000603823 466 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC104763.2-201ENST00000604179 382 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC104237.2-201ENST00000612456 443 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC012409.4-201ENST00000612923 249 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC007998.5-201ENST00000622938 237 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 AC011155.2-201ENST00000623202 216 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 MTND5P42-201ENST00000637720 498 ntBASIC2.63□□□□□ -1.99
NDE1Q9NXR1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNU6-1167P-201ENST00000363227 94 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNU6-1322P-201ENST00000364309 107 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 SNORA69-201ENST00000383895 132 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.402-201ENST00000383972 102 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 Y_RNA.453-201ENST00000384223 109 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNU6-606P-201ENST00000384721 111 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 MIR183-201ENST00000384958 110 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 CIR1P3-201ENST00000405137 479 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 TIMM9P3-201ENST00000428659 274 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AL592045.1-201ENST00000429867 352 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 HMGB1P27-201ENST00000431429 603 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 GTF2IP20-201ENST00000431663 360 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AL591212.2-201ENST00000433923 257 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AL118520.1-201ENST00000450770 291 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNU7-182P-201ENST00000459009 62 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC083798.1-201ENST00000472671 131 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AL135752.1-201ENST00000479477 471 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNA5SP401-201ENST00000515920 127 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 SNORA40.12-201ENST00000516329 111 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNU6-677P-201ENST00000516914 101 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 RNA5SP503-201ENST00000517047 117 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 MTND1P35-201ENST00000526739 508 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC008521.1-201ENST00000587471 187 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AL670379.4-201ENST00000605279 254 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC022893.3-201ENST00000607665 437 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC005609.4-201ENST00000625071 447 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 U6.114-201ENST00000636407 96 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AC006020.1-201ENST00000420179 1854 ntBASIC2.62□□□□□ -1.99
NDE1Q9NXR1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
NDE1Q9NXR1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 MTND5P17-201ENST00000418405 1603 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RNA5SP393-201ENST00000363423 117 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RNY4P14-201ENST00000363656 96 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RNU6-996P-201ENST00000365438 107 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RNVU1-14-201ENST00000384770 164 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL139039.1-201ENST00000401900 692 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RPS12P24-201ENST00000412619 387 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 MTND1P23-201ENST00000416931 372 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL513477.1-202ENST00000417061 214 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.61□□□□□ -1.99
NDE1Q9NXR1 NFU1P2-201ENST00000448700 469 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AC073415.1-201ENST00000449240 153 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AL356010.1-201ENST00000456364 102 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 SNORA59A-201ENST00000459326 152 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 AP000852.1-201ENST00000472460 573 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RPS20P22-201ENST00000473700 357 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 RPL36AP51-201ENST00000487216 318 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 FAM92A1P2-202ENST00000504766 877 ntBASIC2.61□□□□□ -1.99
NDE1Q9NXR1 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms