Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC110994.2-201ENST00000635481 492 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
TREX1Q9NSU2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 RNU6-1159P-201ENST00000362933 107 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 RNU6-1284P-201ENST00000363701 100 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 RNU5A-8P-201ENST00000364102 114 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AL356432.1-201ENST00000405809 419 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 MIR1261-201ENST00000408659 82 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 TOMM20P4-201ENST00000427861 435 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 DNAJC19P4-201ENST00000440115 345 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 NEFMP1-201ENST00000443423 1006 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AL441985.1-201ENST00000457727 251 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AF213884.2-201ENST00000510417 903 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AP004247.1-201ENST00000531556 1289 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC091965.4-201ENST00000607691 587 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 AC090970.3-201ENST00000612566 866 ntBASIC1.82□□□□□ -2.12
TREX1Q9NSU2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.82□□□□□ -2.12
TREX1Q9NSU2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 RNU6-288P-201ENST00000363690 104 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 RNU6-769P-201ENST00000384407 104 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 USP9YP6-201ENST00000413550 854 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 MTATP6P19-201ENST00000413797 659 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AL592045.1-201ENST00000429867 352 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 USP9YP15-201ENST00000442391 422 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 RPL23AP42-201ENST00000471152 471 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 RPL22P13-201ENST00000493291 347 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 CKS1BP2-201ENST00000497342 240 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 SMURF2P1-201ENST00000514992 481 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 RNU6-1183P-201ENST00000517054 60 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AP006587.4-201ENST00000526053 529 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AC136618.2-201ENST00000575091 400 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 BNIP3P9-201ENST00000603714 553 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 uc_338.20-201ENST00000621563 178 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AC091965.5-201ENST00000624785 342 ntBASIC1.81□□□□□ -2.12
TREX1Q9NSU2 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.81□□□□□ -2.12
TREX1Q9NSU2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 ZNF702P-202ENST00000434269 1966 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 SNORD114-1-201ENST00000362705 72 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 RNU6-433P-201ENST00000363216 104 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 SNORD48-201ENST00000364953 64 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 RNU6-1280P-201ENST00000365211 107 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 MIR504-201ENST00000385065 83 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC019129.1-201ENST00000403786 261 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 MIR1294-201ENST00000408503 142 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 ZNF90P2-204ENST00000419323 1075 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AL353689.1-201ENST00000438895 199 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AL049829.1-201ENST00000465411 156 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 RPL23AP41-201ENST00000484754 458 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 RPL36AP48-201ENST00000485521 314 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC104685.1-201ENST00000502445 371 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 MRPS33P3-201ENST00000513456 322 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 RNU6-237P-201ENST00000515985 71 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 SNORA31.3-201ENST00000516029 96 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC068587.4-201ENST00000533893 186 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC007375.1-201ENST00000554513 578 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 BCRP9-201ENST00000605312 388 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC103710.2-201ENST00000609912 942 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AL355472.4-201ENST00000610233 626 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC009318.2-201ENST00000610917 651 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.8□□□□□ -2.12
TREX1Q9NSU2 AC103706.2-201ENST00000638080 240 ntBASIC1.8□□□□□ -2.12
TREX1Q9NSU2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms