Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SNORA31.26-201ENST00000517250 137 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 BNIP3P6-201ENST00000549284 499 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 CYCSP39-201ENST00000565821 309 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AL645944.1-201ENST00000603857 493 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AL157817.1-201ENST00000614264 790 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AC007014.2-201ENST00000615581 479 ntBASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SLC6A13Q9NSD5 AC008669.1-201ENST00000565823 2178 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 RNU1-105P-201ENST00000363470 161 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 RNA5SP72-201ENST00000364442 117 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 SNORD14B-201ENST00000364533 90 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-534P-201ENST00000364877 106 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 DYNLT3P1-201ENST00000378574 347 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 Z98749.2-208ENST00000381646 500 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 CD24P4-201ENST00000382840 243 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AL356057.2-201ENST00000403318 432 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AL627311.1-201ENST00000431514 115 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 CYCSP35-201ENST00000451978 304 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC091885.1-201ENST00000506658 268 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 MTCO3P23-201ENST00000561363 289 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 SNORA59B-202ENST00000578183 701 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 LRRC37A5P-203ENST00000580181 585 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC012119.1-201ENST00000603184 222 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC096577.2-201ENST00000611455 153 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 RMST_4.1-201ENST00000616886 107 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AC022418.1-201ENST00000624118 445 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 AP003400.5-201ENST00000624827 617 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 U6.105-201ENST00000637379 88 ntBASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
SLC6A13Q9NSD5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 OR4G1P-203ENST00000641984 1631 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.295-201ENST00000364918 102 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RNU4-66P-201ENST00000365199 138 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RNU4-20P-201ENST00000365601 151 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 Y_RNA.399-201ENST00000383955 105 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-38P-201ENST00000384085 107 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 MIR514A2-201ENST00000385131 88 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 MIR514A3-201ENST00000385132 88 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-607P-201ENST00000411283 108 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC023141.4-201ENST00000412031 328 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AL592148.1-201ENST00000413568 445 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC245054.2-201ENST00000415639 319 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 CALM1P1-201ENST00000442082 433 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RPS3AP12-201ENST00000443616 753 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 HMGN2P10-201ENST00000448085 265 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 RNU6-333P-201ENST00000459117 107 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC092989.1-201ENST00000481235 277 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 CCDC34P1-201ENST00000507441 517 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 MTND3P25-201ENST00000509243 135 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC074250.1-201ENST00000511117 192 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC074344.1-201ENST00000512823 224 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 MIR892C-201ENST00000516410 77 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC234778.2-201ENST00000566241 354 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC073657.2-201ENST00000605661 303 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC104458.1-201ENST00000608243 463 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AC107294.3-201ENST00000609211 526 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 AL355365.1-201ENST00000616480 294 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 Z83843.1-201ENST00000604070 3685 ntBASIC2.97□□□□□ -1.93
SLC6A13Q9NSD5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
SLC6A13Q9NSD5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms