Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNA5SP267-201ENST00000364893 126 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-224P-201ENST00000384055 107 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 MIR618-201ENST00000385287 98 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL360182.1-201ENST00000397433 468 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 CBX3P9-201ENST00000402326 552 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 FCF1P10-201ENST00000407590 479 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL669831.1-202ENST00000428504 417 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 FAM103A2P-201ENST00000444122 354 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL606517.1-201ENST00000446914 387 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC245517.4-201ENST00000448601 281 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 FDX1P2-201ENST00000450769 375 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 snoU13.14-201ENST00000459372 104 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RPS29P26-201ENST00000477483 171 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 MTCYBP40-201ENST00000509390 1135 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RNA5SP61-201ENST00000516453 100 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-1315P-201ENST00000517187 99 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-902P-201ENST00000517212 91 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 DEFB108A-201ENST00000530110 222 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 RPL21P5-201ENST00000554662 472 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC019288.1-201ENST00000557918 224 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 MTND3P13-201ENST00000574391 343 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 MTCYBP33-201ENST00000575007 1130 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 BNIP3P26-201ENST00000600827 554 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 BNIP3P30-201ENST00000601184 574 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC103710.1-201ENST00000610003 901 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC005962.2-201ENST00000611427 652 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC016769.4-201ENST00000616893 535 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC092656.1-203ENST00000624134 423 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC022513.1-201ENST00000624512 117 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 AC090517.3-201ENST00000625170 141 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 MIR3529-201ENST00000637713 78 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 MTND5P42-201ENST00000637720 498 ntBASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CDC42SE1Q9NRR8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 HAUS6P2-201ENST00000433254 2404 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-271P-201ENST00000363858 105 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 SNORA25.8-201ENST00000364831 128 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 MIR301A-201ENST00000385261 86 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 RN7SKP101-201ENST00000411376 320 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 RAC1P6-201ENST00000423911 575 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL035407.1-201ENST00000429211 571 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 CR769776.1-201ENST00000441254 787 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 MTND2P4-201ENST00000445034 1004 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL035666.1-201ENST00000446195 348 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AP000936.2-201ENST00000447151 681 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC104058.1-201ENST00000448028 297 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 PAXBP1P1-201ENST00000449315 447 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL353752.1-201ENST00000454946 260 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC112492.4-201ENST00000456549 352 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 RPL30P1-201ENST00000488676 339 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC093259.1-201ENST00000509755 300 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-965P-201ENST00000516721 96 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 RNU6-143P-201ENST00000516942 93 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL356057.1-201ENST00000533798 831 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 CR383656.8-201ENST00000549046 145 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC005668.1-201ENST00000571142 476 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 ELOCP29-201ENST00000588193 334 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL136981.2-201ENST00000617319 734 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 ZYXP1-201ENST00000617638 118 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC006338.1-201ENST00000618453 749 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL512427.1-201ENST00000618593 349 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 MIR1248-201ENST00000629190 106 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 AL512643.1-201ENST00000635735 524 ntBASIC0.76□□□□□ -2.29
CDC42SE1Q9NRR8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.75□□□□□ -2.29
CDC42SE1Q9NRR8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms