Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU2-3P-201ENST00000410144 191 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 RPL21P109-201ENST00000422213 475 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 AL158071.1-201ENST00000430315 461 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC092573.2-201ENST00000434546 243 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC115115.1-201ENST00000449927 248 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC107399.1-201ENST00000451226 265 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 MTATP6P7-201ENST00000453315 681 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC011005.2-201ENST00000487324 359 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 RNA5SP454-201ENST00000517231 127 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 RNU6-323P-201ENST00000521915 107 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 GLYCAM1-201ENST00000546596 285 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AMZ2P1-203ENST00000565833 850 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VTA1Q9NP79 AL138726.1-201ENST00000614873 333 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 MIR1302-1-201ENST00000637932 143 ntBASIC3.93□□□□□ -1.78
VTA1Q9NP79 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.93□□□□□ -1.78
VTA1Q9NP79 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VTA1Q9NP79 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VTA1Q9NP79 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
VTA1Q9NP79 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VTA1Q9NP79 Y_RNA.184-201ENST00000363884 108 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 Y_RNA.324-201ENST00000365165 102 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VTA1Q9NP79 Y_RNA.460-201ENST00000384255 102 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 Y_RNA.474-201ENST00000384341 102 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 MIR34A-201ENST00000385130 110 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 MIR325-201ENST00000385260 98 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 RPS4XP3-201ENST00000398541 413 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 MIR548K-201ENST00000408406 116 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 RPL26P27-201ENST00000414397 437 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC098614.2-201ENST00000426040 255 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 TOMM20P4-201ENST00000427861 435 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 SAR1AP4-201ENST00000429225 591 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC236972.2-201ENST00000434979 310 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 Y_RNA.635-201ENST00000459041 101 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 RPS29P2-201ENST00000479278 136 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 AL135752.1-201ENST00000479477 471 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 RNU6-277P-201ENST00000516272 106 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 RNU6-703P-201ENST00000516946 107 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC009902.1-201ENST00000519351 183 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC011471.1-201ENST00000585766 187 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 MIR7112-201ENST00000616126 65 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 AL138880.2-201ENST00000616214 239 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 MIR8057-201ENST00000620957 69 ntBASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
VTA1Q9NP79 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VTA1Q9NP79 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VTA1Q9NP79 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VTA1Q9NP79 AL136164.4-201ENST00000625013 2135 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VTA1Q9NP79 RNU6-562P-201ENST00000362731 107 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 RNU4-79P-201ENST00000362764 141 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 RNU6-593P-201ENST00000364716 112 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 RNU6-1035P-201ENST00000384477 107 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 Y_RNA.623-201ENST00000411128 95 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 CYCSP33-201ENST00000414485 327 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC017079.2-201ENST00000416102 485 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 ATG3P1-201ENST00000419507 911 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 RPS15AP6-201ENST00000420703 385 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 UBE2V1P4-201ENST00000425374 344 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 RPL32P28-201ENST00000443577 397 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 AL590664.1-201ENST00000448065 339 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 RPL7P47-201ENST00000497299 556 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.91□□□□□ -1.78
VTA1Q9NP79 FCF1P8-201ENST00000510322 597 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 AC025755.1-201ENST00000521306 278 ntBASIC3.91□□□□□ -1.78
VTA1Q9NP79 SYF2P1-201ENST00000550658 413 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms