Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL121772.2-201ENST00000614331 297 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 U4.5-201ENST00000617137 123 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 AL031601.2-202ENST00000622650 282 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 AC022418.1-201ENST00000624118 445 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 AP003400.5-201ENST00000624827 617 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 MIR1321-201ENST00000637766 79 ntBASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.75□□□□□ -1.97
CHMP1AQ9HD42 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 RNU1-100P-201ENST00000365255 165 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 RNU4-20P-201ENST00000365601 151 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 RNU6-434P-201ENST00000384376 107 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AL606923.1-201ENST00000406616 190 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 RN7SKP111-201ENST00000410349 271 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 RN7SKP202-201ENST00000410439 330 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 RNU6-1068P-201ENST00000410958 103 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 PGBD4P6-201ENST00000421501 610 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 HMGN2P31-201ENST00000432430 273 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 MTND1P4-201ENST00000435196 415 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC009296.1-201ENST00000443146 155 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 HMGB1P30-201ENST00000492455 606 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 SCARNA17.1-201ENST00000516211 143 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 SCARNA17.2-201ENST00000516334 143 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 SNORD19.2-201ENST00000516978 73 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 GLYCAM1-201ENST00000546596 285 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC007151.1-201ENST00000572774 483 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 MIR3160-1-201ENST00000577972 85 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC010620.2-201ENST00000600135 313 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 SCARNA17.4-201ENST00000614296 143 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC090517.2-201ENST00000614966 680 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 uc_338.34-201ENST00000617467 174 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 YWHAEP7-203ENST00000622054 312 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 AL034408.1-202ENST00000636088 415 ntBASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CHMP1AQ9HD42 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 Y_RNA.38-201ENST00000362617 102 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 RNU1-109P-201ENST00000383960 147 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 RNU6-38P-201ENST00000384085 107 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 RNU6-72P-201ENST00000384285 79 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 CIR1P3-201ENST00000405137 479 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 Y_RNA.625-201ENST00000411256 107 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 PRPS1P1-201ENST00000445305 876 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 RPL21P23-201ENST00000446654 460 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 NIPA2P5-201ENST00000452282 464 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 RNU6-333P-201ENST00000459117 107 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 FAM133DP-201ENST00000464802 691 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AL672167.3-201ENST00000465951 960 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC103987.1-201ENST00000473394 348 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC068587.1-201ENST00000483613 781 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC106707.2-201ENST00000484182 374 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC011352.1-201ENST00000512300 793 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 TRMT10BP1-201ENST00000519377 943 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 MTND4P7-201ENST00000523876 130 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AP003033.1-201ENST00000527244 415 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC005476.1-201ENST00000554427 397 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AL162413.1-201ENST00000603198 110 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 AC011890.2-201ENST00000613393 294 ntBASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.73□□□□□ -1.97
CHMP1AQ9HD42 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms