Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL590135.1-201ENST00000422215 156 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AL158156.1-201ENST00000422509 473 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MTCO1P39-201ENST00000426148 480 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC091390.3-201ENST00000426478 338 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC087650.1-201ENST00000431445 468 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 RPEP5-201ENST00000441137 268 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 NUTF2P3-201ENST00000448540 384 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 RN7SL585P-201ENST00000470538 280 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 UQCRHP4-201ENST00000471686 272 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC091167.1-201ENST00000492017 396 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC007458.1-201ENST00000542812 373 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 RRN3P3-201ENST00000549207 578 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 FAM60BP-201ENST00000578364 658 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MIR5701-3-201ENST00000578890 82 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MIR5701-1-201ENST00000585138 82 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AL161798.1-201ENST00000604630 131 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MIR5701-2-201ENST00000615634 82 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 MIR3653-201ENST00000625572 110 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 AP000560.1-201ENST00000624150 1937 ntBASIC3.72□□□□□ -1.81
SEC61A2Q9H9S3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.71□□□□□ -1.81
SEC61A2Q9H9S3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SEC61A2Q9H9S3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SEC61A2Q9H9S3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.71□□□□□ -1.81
SEC61A2Q9H9S3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SEC61A2Q9H9S3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-595P-201ENST00000363944 107 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 SNORA70.2-201ENST00000364506 135 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-200P-201ENST00000364743 107 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 RNU6-338P-201ENST00000383888 105 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 MIR215-201ENST00000384858 110 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.592-201ENST00000410274 109 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 PIGPP3-201ENST00000425307 415 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 MTND3P9-201ENST00000429526 346 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC009963.2-201ENST00000453431 138 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC087588.1-201ENST00000462203 316 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 MIR2114-201ENST00000516645 80 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC034114.1-201ENST00000520293 285 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC107294.1-201ENST00000609524 467 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 MIR6716-201ENST00000613413 80 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 AC137590.2-201ENST00000619709 240 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 RLIMP1-201ENST00000339626 1680 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 FAM35DP-201ENST00000323387 2712 ntBASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SEC61A2Q9H9S3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.183-201ENST00000363882 113 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 Y_RNA.478-201ENST00000384358 107 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 MIR514A1-201ENST00000385133 98 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 RNU2-25P-201ENST00000411041 191 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 RNA5SP306-201ENST00000411087 107 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 SNORD56-201ENST00000413522 71 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 EIF4EP2-201ENST00000422816 654 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AC139712.2-201ENST00000424302 339 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AL139109.1-201ENST00000455491 297 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AC006517.1-201ENST00000480485 328 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 SNORA31.9-201ENST00000516429 84 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 MRPL49P2-201ENST00000521066 465 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 MIR5696-201ENST00000578474 85 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 SNORD84-203ENST00000584275 78 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AL355877.2-201ENST00000603670 358 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AC098479.1-201ENST00000609225 154 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 FAM27D1-201ENST00000612308 341 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 MIR6798-201ENST00000612887 67 ntBASIC3.7□□□□□ -1.82
SEC61A2Q9H9S3 AC004852.3-201ENST00000614131 326 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms