Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
RNF38Q9H0F5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RNF38Q9H0F5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AC032011.1-201ENST00000611703 1549 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.64-201ENST00000362845 102 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 RNU6-817P-201ENST00000391083 104 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 ELOCP20-201ENST00000422460 345 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AL360271.2-201ENST00000447710 161 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 MTCO3P8-201ENST00000453691 755 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 FO393415.2-201ENST00000480085 343 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 SNORA67.7-201ENST00000516664 135 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 RNU1-45P-201ENST00000517191 141 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 RNA5SP179-201ENST00000517284 121 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 MIR5685-201ENST00000579080 79 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 MIR5692A1-201ENST00000580523 69 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 RAC1P9-201ENST00000604990 392 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AC091167.4-201ENST00000605079 184 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AL160281.1-201ENST00000605307 311 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 MIR432-201ENST00000606207 94 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 AL354798.1-201ENST00000622505 329 ntBASIC4.17□□□□□ -1.74
RNF38Q9H0F5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RNF38Q9H0F5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MARK2P15-201ENST00000432204 2186 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MAPK10-253ENST00000641010 4072 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.214-201ENST00000364201 112 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.376-201ENST00000365638 108 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 Y_RNA.577-201ENST00000384794 101 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR514A1-201ENST00000385133 98 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR1290-201ENST00000408735 78 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 RPL27AP8-201ENST00000424277 446 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 HMGB1P27-201ENST00000431429 603 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 PRDX3P3-201ENST00000447765 522 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC069499.1-201ENST00000489433 509 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 RPL21P129-201ENST00000491732 478 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MTND1P19-201ENST00000511780 315 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 SNORA40.14-201ENST00000516543 86 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 RNA5SP309-201ENST00000516670 106 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 RNU6-914P-201ENST00000516749 109 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 RN7SKP258-201ENST00000517151 304 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC007991.1-201ENST00000522680 631 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 YPEL5P3-201ENST00000547227 352 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR4273-201ENST00000582824 84 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC096772.1-201ENST00000609146 564 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR1244-1-201ENST00000612829 85 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC005344.1-201ENST00000613391 459 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AL138825.1-201ENST00000618587 192 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC034229.5-201ENST00000624258 185 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR1244-3-201ENST00000635744 85 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR1244-2-201ENST00000636449 85 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MIR1244-4-202ENST00000636813 85 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 OR4G2P-202ENST00000641004 1759 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RNF38Q9H0F5 AC010733.2-201ENST00000589496 5702 ntBASIC4.16□□□□□ -1.74
RNF38Q9H0F5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
RNF38Q9H0F5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF38Q9H0F5 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
RNF38Q9H0F5 RNY1P16-201ENST00000363063 111 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 RNA5SP399-201ENST00000364003 117 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 SNORA51.11-201ENST00000384442 131 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 MIR554-201ENST00000384874 96 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 MIR3074-201ENST00000384885 81 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AL138885.1-201ENST00000405921 675 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 RNU2-37P-201ENST00000410695 177 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AL030996.1-201ENST00000411430 235 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.15□□□□□ -1.75
RNF38Q9H0F5 AC073910.1-201ENST00000445047 438 ntBASIC4.15□□□□□ -1.75
RNF38Q9H0F5 RPS3AP46-201ENST00000448352 682 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms