Protein–RNA interactions for Protein: Q9C0C6

CIPC, CLOCK-interacting pacemaker, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIPCQ9C0C6 APOOP3-201ENST00000536787 586 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 IMMP1LP2-201ENST00000552954 492 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 MIR3921-201ENST00000577308 85 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 AC002545.1-201ENST00000592511 181 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 Y_RNA.812-201ENST00000610788 101 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 Y_RNA.784-201ENST00000613803 101 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 Y_RNA.787-201ENST00000616522 101 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 Y_RNA.780-201ENST00000617336 101 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 Y_RNA.801-201ENST00000619005 101 ntBASIC3.44□□□□□ -1.86
CIPCQ9C0C6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CIPCQ9C0C6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 RNU6-512P-201ENST00000364438 103 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 SNORD42.2-201ENST00000365570 69 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AL360182.1-201ENST00000397433 468 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 Z85995.1-201ENST00000415547 335 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AL139396.1-201ENST00000421137 167 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 RPS24P13-201ENST00000442520 397 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 RNU7-152P-201ENST00000458982 64 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 RPL37P6-201ENST00000460682 294 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 HMGB3P15-201ENST00000507326 574 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC005741.1-201ENST00000511094 432 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 RPL39P5-202ENST00000512505 151 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 SNORA70.14-201ENST00000516205 110 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 SNORA31.8-201ENST00000516327 108 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 CYCSP27-201ENST00000527643 293 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AL163153.1-201ENST00000554223 283 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AL121821.2-201ENST00000556081 394 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC020661.2-201ENST00000560114 134 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC007151.1-201ENST00000572774 483 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 MIR5680-201ENST00000577577 84 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC098826.3-201ENST00000603823 466 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AL161798.1-201ENST00000604630 131 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC124303.1-201ENST00000605703 360 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC090132.2-201ENST00000615881 347 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.43□□□□□ -1.86
CIPCQ9C0C6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.43□□□□□ -1.86
CIPCQ9C0C6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AL513302.2-201ENST00000562313 1842 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 TNPO1P3-201ENST00000436471 2662 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 MIR423-201ENST00000362201 94 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AL590004.1-201ENST00000405321 300 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RNU6-370P-201ENST00000411008 104 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RNU6-1304P-201ENST00000411374 106 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RPL21P90-201ENST00000415692 466 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AL353729.1-201ENST00000425044 720 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RPL23AP69-201ENST00000431134 458 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 Y_RNA.639-201ENST00000458981 102 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AP000873.1-201ENST00000463987 400 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RPS20P22-201ENST00000473700 357 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RPS27P27-201ENST00000498779 255 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC110794.1-201ENST00000505816 425 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RNU6-1256P-201ENST00000516539 103 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 RNU6-1073P-201ENST00000517182 106 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC004024.1-201ENST00000549244 247 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC002044.1-201ENST00000606707 158 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AL133215.3-201ENST00000609801 448 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC084781.2-201ENST00000615568 161 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 AC090971.5-201ENST00000621102 293 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 Z99571.1-201ENST00000636677 394 ntBASIC3.42□□□□□ -1.86
CIPCQ9C0C6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CIPCQ9C0C6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CIPCQ9C0C6 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CIPCQ9C0C6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms