Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RNU6-72P-201ENST00000384285 79 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 MIR518D-201ENST00000385014 87 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 U3.37-201ENST00000408528 213 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 RNU4-6P-201ENST00000410804 122 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 Z99755.1-201ENST00000414048 380 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 MTCO2P12-201ENST00000427426 682 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 MTCYBP6-201ENST00000441810 138 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.52□□□□□ -1.85
VRK1Q99986 NOTCH2P1-201ENST00000443481 624 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 AC013470.1-201ENST00000453438 462 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 RNU7-187P-201ENST00000458985 68 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 Y_RNA.653-201ENST00000459091 95 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 RNU6-1037P-201ENST00000459571 107 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 RPL23AP45-201ENST00000476406 468 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 AC005741.1-201ENST00000511094 432 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 AC026782.1-201ENST00000512952 449 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 Y_RNA.708-201ENST00000516950 96 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 TRMT10BP1-201ENST00000519377 943 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 AC104576.1-201ENST00000524225 88 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.52□□□□□ -1.85
VRK1Q99986 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VRK1Q99986 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.52□□□□□ -1.85
VRK1Q99986 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.52□□□□□ -1.85
VRK1Q99986 AC120057.2-201ENST00000571520 271 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.52□□□□□ -1.85
VRK1Q99986 AL591516.1-201ENST00000611326 274 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 AL161629.2-201ENST00000615347 275 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.52□□□□□ -1.85
VRK1Q99986 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK1Q99986 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK1Q99986 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VRK1Q99986 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
VRK1Q99986 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VRK1Q99986 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VRK1Q99986 KPNA2P1-201ENST00000458289 1591 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.51□□□□□ -1.85
VRK1Q99986 SNORD35B-201ENST00000363660 87 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
VRK1Q99986 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VRK1Q99986 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 RN7SKP202-201ENST00000410439 330 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AL030996.1-201ENST00000411430 235 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.51□□□□□ -1.85
VRK1Q99986 AL691449.1-201ENST00000426570 421 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.51□□□□□ -1.85
VRK1Q99986 AC007389.2-201ENST00000434630 306 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC098831.1-201ENST00000440661 216 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 MRPS31P2-201ENST00000451581 518 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 RNA5SP246-201ENST00000458909 119 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 Y_RNA.639-201ENST00000458981 102 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 RN7SL271P-201ENST00000487601 295 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 RPL29P14-201ENST00000495837 428 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.51□□□□□ -1.85
VRK1Q99986 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.51□□□□□ -1.85
VRK1Q99986 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.51□□□□□ -1.85
VRK1Q99986 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.51□□□□□ -1.85
VRK1Q99986 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.51□□□□□ -1.85
VRK1Q99986 AP000654.2-201ENST00000605633 586 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC008962.1-201ENST00000605729 304 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC019193.3-201ENST00000609144 554 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC133104.2-201ENST00000615272 193 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 MIR6134-201ENST00000617606 109 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 AC090971.5-201ENST00000621102 293 ntBASIC3.51□□□□□ -1.85
VRK1Q99986 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.51□□□□□ -1.85
VRK1Q99986 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VRK1Q99986 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VRK1Q99986 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.51□□□□□ -1.85
VRK1Q99986 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VRK1Q99986 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VRK1Q99986 AP001148.1-201ENST00000624124 2359 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 RNA5SP295-201ENST00000362655 121 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 Y_RNA.146-201ENST00000363549 102 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 RN7SKP280-201ENST00000364196 304 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 MIR554-201ENST00000384874 96 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 MIR134-201ENST00000385258 73 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 SNORA75.4-201ENST00000391278 119 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK1Q99986 RNU6-1050P-201ENST00000410388 107 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.5□□□□□ -1.85
VRK1Q99986 AL117339.3-201ENST00000418733 162 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.5□□□□□ -1.85
VRK1Q99986 RPL23AP82-202ENST00000427528 469 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 AC093151.1-201ENST00000427711 313 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 RPS15AP10-201ENST00000432472 382 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 RPS29P7-201ENST00000439662 171 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 AC006011.1-201ENST00000442758 349 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.5□□□□□ -1.85
VRK1Q99986 AC128713.1-201ENST00000471495 306 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 AC027575.1-201ENST00000481064 460 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.5□□□□□ -1.85
VRK1Q99986 RPS27AP10-201ENST00000496103 208 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 MTCYBP40-201ENST00000509390 1135 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 AC113155.1-201ENST00000511141 769 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 Y_RNA.687-201ENST00000516558 91 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 AC023632.4-201ENST00000517783 191 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VRK1Q99986 CBX3P7-201ENST00000532876 502 ntBASIC3.5□□□□□ -1.85
VRK1Q99986 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.5□□□□□ -1.85
VRK1Q99986 AL391261.3-201ENST00000557194 520 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms