Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 RNU6-123P-201ENST00000516163 102 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 MTND4LP26-201ENST00000518144 282 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 HSPE1P20-201ENST00000538133 289 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMC6Q96SB8 ADI1P3-201ENST00000549509 470 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 RPL23AP88-201ENST00000605759 454 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 MIR15A-201ENST00000607334 83 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 AC026585.1-201ENST00000619582 524 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 Z99571.1-201ENST00000636677 394 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 U2.21-201ENST00000637295 81 ntBASIC3□□□□□ -1.93
SMC6Q96SB8 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMC6Q96SB8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3□□□□□ -1.93
SMC6Q96SB8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3□□□□□ -1.93
SMC6Q96SB8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMC6Q96SB8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL035425.3-201ENST00000564206 4996 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RNU6-884P-201ENST00000363889 107 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RNU6-996P-201ENST00000365438 107 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 Y_RNA.402-201ENST00000383972 102 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 MIR128-1-201ENST00000384921 82 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 NDUFB4P4-201ENST00000404822 243 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL590002.1-201ENST00000406554 418 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RNU4-46P-201ENST00000410818 138 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 EEF1A1P40-201ENST00000412883 573 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 OR6C66P-201ENST00000414917 930 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RPL36AP53-201ENST00000432891 316 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RPS29P6-201ENST00000438196 145 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RPL7P54-201ENST00000438336 674 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 Z96811.1-201ENST00000445880 108 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL118520.1-201ENST00000450770 291 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL162395.1-201ENST00000457882 422 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RPS29P15-201ENST00000458329 171 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RPS29P12-201ENST00000460178 152 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 RBBP4P6-201ENST00000508098 202 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 RNA5SP503-201ENST00000517047 117 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC109635.3-201ENST00000529536 185 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.99□□□□□ -1.93
SMC6Q96SB8 MTATP6P3-201ENST00000581686 676 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 MIR4424-201ENST00000585257 86 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 BNIP3P9-201ENST00000603714 553 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC008536.2-201ENST00000607284 349 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AC010338.1-201ENST00000621823 717 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 AL512643.1-201ENST00000635735 524 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 MIR3688-2-201ENST00000636963 87 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
SMC6Q96SB8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SMC6Q96SB8 ELF2P3-201ENST00000445099 1506 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC6Q96SB8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC6Q96SB8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC6Q96SB8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC6Q96SB8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SMC6Q96SB8 SNORA69-201ENST00000383895 132 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 SNORA7.4-201ENST00000384249 137 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 SNORA48.2-201ENST00000390926 124 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 RNU6-550P-201ENST00000391057 101 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 RNU6-903P-201ENST00000391270 109 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AC096664.2-201ENST00000411843 406 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AL160275.3-201ENST00000423876 471 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 USP9YP28-201ENST00000435142 589 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 Z75741.1-201ENST00000446793 314 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 AL121769.1-201ENST00000469473 401 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 RPS29P25-201ENST00000481709 171 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 MTAPP1-201ENST00000489154 819 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 AC104806.1-201ENST00000508720 308 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 RNU6-1315P-201ENST00000517187 99 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 PSMA2P1-201ENST00000526365 646 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 RANP3-201ENST00000530970 276 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AL138976.2-201ENST00000563989 694 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 MIR5004-201ENST00000579078 107 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 AC008945.2-201ENST00000606056 604 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 U6atac.1-201ENST00000616025 117 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 FER-210ENST00000628534 558 ntTSL 5 BASIC2.98□□□□□ -1.93
SMC6Q96SB8 CKAP2P1-201ENST00000555477 2049 ntBASIC2.98□□□□□ -1.93
SMC6Q96SB8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms